RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 BORCS6Q96GS4 357 aa16.04■□□□□ 0.16
CPNE1-215ENST00000437100 TSG101Q99816 390 aa16.04■□□□□ 0.16
CPNE1-215ENST00000437100 FUCA2Q9BTY2 467 aa16.04■□□□□ 0.16
CPNE1-215ENST00000437100 MKNK1Q9BUB5 465 aa16.04■□□□□ 0.16
CPNE1-215ENST00000437100 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
CPNE1-215ENST00000437100 RWDD2AQ9UIY3 292 aa16.04■□□□□ 0.16
CPNE1-215ENST00000437100 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-215ENST00000437100 CARNS1A5YM72 827 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 EPOPA6NHQ4 379 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
CPNE1-215ENST00000437100 ZC3H11AO75152 810 aaKnown RBP eCLIP16.03■□□□□ 0.16
CPNE1-215ENST00000437100 RB1P06400 928 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 RPL13P26373 211 aaKnown RBP16.03■□□□□ 0.16
CPNE1-215ENST00000437100 SLC11A1P49279 550 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 CLDN10P78369 228 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 FKBP3Q00688 224 aaKnown RBP16.03■□□□□ 0.16
CPNE1-215ENST00000437100 RNASELQ05823 741 aaKnown RBP16.03■□□□□ 0.16
CPNE1-215ENST00000437100 ENPEPQ07075 957 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 ADAM9Q13443 819 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 EPC2Q52LR7 807 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 KCNT2Q6UVM3 1135 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 TMEM173Q86WV6 379 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-215ENST00000437100 PLEKHO2Q8TD55 490 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 C18orf25Q96B23 403 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-215ENST00000437100 KIF12Q96FN5 646 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 ZNF558Q96NG5 402 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 ZNF576Q9H609 170 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 PDE11AQ9HCR9 933 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 MARCH5Q9NX47 278 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 TUBGCP4Q9UGJ1 667 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 SZT2Q5T011 3432 aa16.03■□□□□ 0.16
CPNE1-215ENST00000437100 PTPRJQ12913 1337 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 BICDL2A1A5D9 508 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 EFEMP2O95967 443 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 ERCC5P28715 1186 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-215ENST00000437100 LRPAP1P30533 357 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 PBX3P40426 434 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 SPAG1Q07617 926 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 STX1AQ16623 288 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 SPATA1Q5VX52 437 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 SASS6Q6UVJ0 657 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 CXorf38Q8TB03 319 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 BCL7CQ8WUZ0 217 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-215ENST00000437100 CEP63Q96MT8 703 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 UROC1Q96N76 676 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 PAAF1Q9BRP4 392 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 GOLGA2P5Q9HBQ8 144 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 AAASQ9NRG9 546 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 ANO10Q9NW15 660 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 CACNG4Q9UBN1 327 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 DACH1Q9UI36 760 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 UBQLN1Q9UMX0 589 aaKnown RBP16.02■□□□□ 0.16
CPNE1-215ENST00000437100 FRMD4BQ9Y2L6 1034 aa16.02■□□□□ 0.16
CPNE1-215ENST00000437100 CITO14578 2027 aa16.02■□□□□ 0.15
CPNE1-215ENST00000437100 CHD7Q9P2D1 2997 aa16.02■□□□□ 0.15
CPNE1-215ENST00000437100 KIAA1671Q9BY89 1806 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 CASTOR2A6NHX0 329 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 TMEM189-UBE2V1I3L0A0 370 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 NRP1O14786 923 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 CETN3O15182 167 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-215ENST00000437100 CTNNB1P35222 781 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 PPM1AP35813 382 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 PSMC2P35998 433 aaKnown RBP16.01■□□□□ 0.15
CPNE1-215ENST00000437100 STX17P56962 302 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 PLCB3Q01970 1234 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 TYRO3Q06418 890 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 TMEM132DQ14C87 1099 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 SURF1Q15526 300 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 UPP1Q16831 310 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 CEP135Q66GS9 1140 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 CD300LGQ6UXG3 332 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 WDR49Q8IV35 697 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 TMEM130Q8N3G9 435 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 RDH13Q8NBN7 331 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 TMC2Q8TDI7 906 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 PARD3BQ8TEW8 1205 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 EEF2KMTQ96G04 330 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 FAM193BQ96PV7 902 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-215ENST00000437100 CGRRF1Q99675 332 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 ANK1P16157 1881 aa16.01■□□□□ 0.15
CPNE1-215ENST00000437100 PDCD11Q14690 1871 aaKnown RBP16■□□□□ 0.15
CPNE1-215ENST00000437100 F8W810 466 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 H3BNC9 293 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 LPXNO60711 386 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 ALDH2P05091 517 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 RPL9P32969 192 aaKnown RBP16■□□□□ 0.15
CPNE1-215ENST00000437100 ALDH7A1P49419 539 aaKnown RBP16■□□□□ 0.15
CPNE1-215ENST00000437100 GUCY2FP51841 1108 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 C1orf220Q5T0J3 134 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 SPOUT1Q5T280 376 aaKnown RBP16■□□□□ 0.15
CPNE1-215ENST00000437100 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
CPNE1-215ENST00000437100 FAM186BQ8IYM0 893 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 RNF168Q8IYW5 571 aaPredicted RBP16■□□□□ 0.15
CPNE1-215ENST00000437100 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 KLHL23Q8NBE8 558 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 FBXO22Q8NEZ5 403 aa16■□□□□ 0.15
CPNE1-215ENST00000437100 NOC3LQ8WTT2 800 aaKnown RBP16■□□□□ 0.15
CPNE1-215ENST00000437100 ARNTL2Q8WYA1 636 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms