RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CCDC172P0C7W6 258 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 XRCC6P12956 609 aaKnown RBP eCLIP6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 INSRRP14616 1297 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 TMOD1P28289 359 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 STAT6P42226 847 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 GRIN1Q05586 938 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 POU5F1BQ06416 359 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 IFT88Q13099 833 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 KARSQ15046 597 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 GRIK4Q16099 956 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 ECM1Q16610 540 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 UGCGQ16739 394 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 RSPH3Q86UC2 560 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 CD163Q86VB7 1156 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 SESTD1Q86VW0 696 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 TTC9Q92623 222 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 KAT2BQ92831 832 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 CHAMP1Q96JM3 812 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 HSD17B14Q9BPX1 270 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 RNPEPQ9H4A4 650 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 RETREG1Q9H6L5 497 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 DDX19AQ9NUU7 478 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 SETD4Q9NVD3 440 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 CNTN3Q9P232 1028 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 PRKAG2Q9UGJ0 569 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 EGFL7Q9UHF1 273 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 GTF2IRD1Q9UHL9 959 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 COL4A3BPQ9Y5P4 624 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 FRMPD3Q5JV73 1810 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 MYH15Q9Y2K3 1946 aa6.8□□□□□ -1.32
ECHDC1-208ENST00000436638 DOCK5Q9H7D0 1870 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 A0A1W2PQ27 194 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 A0A1W2PQ64 194 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 A0A1W2PQD8 194 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 PABPN1LA6NDY0 278 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 M0QZ92 97 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 KIF5CO60282 957 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 ZNF862O60290 1169 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 FZD6O60353 706 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 HIP1RO75146 1068 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 EYA4O95677 639 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 S100BP04271 92 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 RPLP2P05387 115 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 KRT18P05783 430 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 CYP2C9P11712 490 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 COL6A1P12109 1028 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 CES1P23141 567 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 PAX7P23759 505 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 VAMP1P23763 118 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 CMA1P23946 247 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 KLRC1P26715 233 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 CHRNA4P43681 627 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 DNM2P50570 870 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 POLGP54098 1239 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 RTP1P59025 263 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 AMPD3Q01432 767 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 BFSP2Q13515 415 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 DHX8Q14562 1220 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 MAPRE1Q15691 268 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 PTGISQ16647 500 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 TRIM60Q495X7 471 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 ZC3H12AQ5D1E8 599 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 HYIQ5T013 277 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 RNF187Q5TA31 235 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 PLA2G4FQ68DD2 849 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 SHC4Q6S5L8 630 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 XKR5Q6UX68 686 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 LMNTD2Q8IXW0 634 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 CEP57L1Q8IYX8 460 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 METTL13Q8N6R0 699 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 C1orf127Q8N9H9 656 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 FSIP1Q8NA03 581 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 IQUBQ8NA54 791 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 PIGOQ8TEQ8 1089 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 PPP1R13LQ8WUF5 828 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 TCP11Q8WWU5 503 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 SLC7A3Q8WY07 619 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 MRPS27Q92552 414 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 DPF3Q92784 378 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 DHX58Q96C10 678 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 EPSTI1Q96J88 318 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 MMTAG2Q9BU76 263 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 PANK2Q9BZ23 570 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 SUGCTQ9HAC7 445 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 CYP26B1Q9NR63 512 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 CGNQ9P2M7 1197 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 KANSL3Q9P2N6 904 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 TUBE1Q9UJT0 475 aa6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 DBR1Q9UK59 544 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-208ENST00000436638 A0A087WWV3 80 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 A0A1B0GVL5 298 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 E9PMD0 336 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 TREHO43280 583 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 GAS2O43903 313 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 USO1O60763 962 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 PRPF40AO75400 957 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 CLTBP09497 229 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 PLA2G4BP0C869 781 aa6.78□□□□□ -1.32
ECHDC1-208ENST00000436638 PLCG1P19174 1290 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms