RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 KCNG1Q9UIX4 513 aa22.58■■□□□ 1.21
LMBR1-203ENST00000414218 FBXW11Q9UKB1 542 aa22.58■■□□□ 1.21
LMBR1-203ENST00000414218 CITO14578 2027 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 I3L4J1 428 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 MAPTP10636 758 aaKnown RBP22.57■■□□□ 1.2
LMBR1-203ENST00000414218 UBA7P41226 1012 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 TDGQ13569 410 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 CUL4AQ13619 759 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 PDXDC1Q6P996 788 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 BRAPQ7Z569 592 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 C3orf58Q8NDZ4 430 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 SNX27Q96L92 541 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 MYADMQ96S97 322 aa22.57■■□□□ 1.2
LMBR1-203ENST00000414218 SLC26A4O43511 780 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 OR1D2P34982 312 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 BRCC3P46736 316 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 GRIN1Q05586 938 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 DHX8Q14562 1220 aaKnown RBP22.56■■□□□ 1.2
LMBR1-203ENST00000414218 LRRC15Q8TF66 581 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 CALML4Q96GE6 196 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 DDX27Q96GQ7 796 aaKnown RBP22.56■■□□□ 1.2
LMBR1-203ENST00000414218 PRRX2Q99811 253 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 SLC38A7Q9NVC3 462 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 ANKFY1Q9P2R3 1169 aa22.56■■□□□ 1.2
LMBR1-203ENST00000414218 VPS37CA5D8V6 355 aaPredicted RBP22.55■■□□□ 1.2
LMBR1-203ENST00000414218 MEFVO15553 781 aaPredicted RBP22.55■■□□□ 1.2
LMBR1-203ENST00000414218 TRAPPC3O43617 180 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 TOM1L1O75674 476 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 BMP15O95972 392 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 KCNE1P15382 129 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 TKTP29401 623 aaKnown RBP22.55■■□□□ 1.2
LMBR1-203ENST00000414218 NOLC1Q14978 699 aaKnown RBP eCLIP22.55■■□□□ 1.2
LMBR1-203ENST00000414218 SF3A1Q15459 793 aaKnown RBP22.55■■□□□ 1.2
LMBR1-203ENST00000414218 SEZ6Q53EL9 994 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 LIN9Q5TKA1 542 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 GPBP1Q86WP2 473 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 RSAD2Q8WXG1 361 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 C18orf25Q96B23 403 aaPredicted RBP22.55■■□□□ 1.2
LMBR1-203ENST00000414218 IGSF9Q9P2J2 1179 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 MTRRQ9UBK8 725 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 DOCK6Q96HP0 2047 aa22.55■■□□□ 1.2
LMBR1-203ENST00000414218 C8AP07357 584 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 PTPN5P54829 565 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 TCF15Q12870 199 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 RAB33AQ14088 237 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 PPM1LQ5SGD2 360 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 RSPO2Q6UXX9 243 aaPredicted RBP22.54■■□□□ 1.2
LMBR1-203ENST00000414218 ZPBP2Q6X784 338 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 GET4Q7L5D6 327 aaPredicted RBP22.54■■□□□ 1.2
LMBR1-203ENST00000414218 REEP2Q9BRK0 252 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 BLOC1S4Q9NUP1 217 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 CNTN3Q9P232 1028 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 LARSQ9P2J5 1176 aaKnown RBP22.54■■□□□ 1.2
LMBR1-203ENST00000414218 EPS15L1Q9UBC2 864 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 DOCK8Q8NF50 2099 aa22.54■■□□□ 1.2
LMBR1-203ENST00000414218 PODXLO00592 558 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 CLDN3O15551 220 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 HNRNPA1P09651 372 aaKnown RBP eCLIP22.53■■□□□ 1.2
LMBR1-203ENST00000414218 PLCG1P19174 1290 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 LONP1P36776 959 aaKnown RBP22.53■■□□□ 1.2
LMBR1-203ENST00000414218 MATR3P43243 847 aaKnown RBP eCLIP22.53■■□□□ 1.22e-6■■■■□ 20.9
LMBR1-203ENST00000414218 NCKAP1LP55160 1127 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 MCM6Q14566 821 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 KARSQ15046 597 aaKnown RBP22.53■■□□□ 1.2
LMBR1-203ENST00000414218 SLC10A6Q3KNW5 377 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 ANKS3Q6ZW76 656 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 HAUS6Q7Z4H7 955 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 GRASPQ7Z6J2 395 aaPredicted RBP22.53■■□□□ 1.2
LMBR1-203ENST00000414218 BICD1Q96G01 975 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 MFSD1Q9H3U5 465 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.53■■□□□ 1.2
LMBR1-203ENST00000414218 ODF2LQ9ULJ1 636 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 DUSP12Q9UNI6 340 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 CDY1Q9Y6F8 540 aa22.53■■□□□ 1.2
LMBR1-203ENST00000414218 H0YCG3 227 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 CCL16O15467 120 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 NARSO43776 548 aaKnown RBP22.52■■□□□ 1.2
LMBR1-203ENST00000414218 FSHRP23945 695 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 MRE11P49959 708 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 NTHL1P78549 312 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 MCL1Q07820 350 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 AXDND1Q5T1B0 1012 aaPredicted RBP22.52■■□□□ 1.2
LMBR1-203ENST00000414218 RASSF8Q8NHQ8 419 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 SLC7A14Q8TBB6 771 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 PHOX2BQ99453 314 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 HAPLN2Q9GZV7 340 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 BACE2Q9Y5Z0 518 aa22.52■■□□□ 1.2
LMBR1-203ENST00000414218 FAM13AO94988 1023 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 LAMP2P13473 410 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 PDCP20941 246 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 RPL9P32969 192 aaKnown RBP22.51■■□□□ 1.19
LMBR1-203ENST00000414218 ASTLQ6HA08 431 aaPredicted RBP22.51■■□□□ 1.19
LMBR1-203ENST00000414218 SLC44A3Q8N4M1 653 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 MYCT1Q8N699 235 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 TMEM105Q8N8V8 129 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 RAD54LQ92698 747 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 FBXL21Q9UKT6 434 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 POLIQ9UNA4 740 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 CLIC4Q9Y696 253 aa22.51■■□□□ 1.19
LMBR1-203ENST00000414218 PDCD11Q14690 1871 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms