RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 BACE1P56817 501 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 ADCY2Q08462 1091 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 RNF187Q5TA31 235 aaPredicted RBP16.97■□□□□ 0.31
HOXD3-202ENST00000410016 KCNV1Q6PIU1 500 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 CPA5Q8WXQ8 436 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 TAOK3Q9H2K8 898 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 PCDHB2Q9Y5E7 798 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 C4BPAP04003 597 aaKnown RBP16.97■□□□□ 0.31
HOXD3-202ENST00000410016 PSAPP07602 524 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 IVDP26440 423 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 ACTN3Q08043 901 aaPredicted RBP16.97■□□□□ 0.31
HOXD3-202ENST00000410016 ZACNQ401N2 412 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 SGO2Q562F6 1265 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 RHBDF2Q6PJF5 856 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 ABHD15Q6UXT9 468 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 MMS22LQ6ZRQ5 1243 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 UHMK1Q8TAS1 419 aaKnown RBP16.97■□□□□ 0.31
HOXD3-202ENST00000410016 EPS8L3Q8TE67 593 aaKnown RBP16.97■□□□□ 0.31
HOXD3-202ENST00000410016 CHMP6Q96FZ7 201 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 CHST7Q9NS84 486 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 WHRNQ9P202 907 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 ZNF214Q9UL59 606 aaPredicted RBP16.97■□□□□ 0.31
HOXD3-202ENST00000410016 ADAMTS5Q9UNA0 930 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
HOXD3-202ENST00000410016 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
HOXD3-202ENST00000410016 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 EXTL3O43909 919 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 DKC1O60832 514 aaKnown RBP eCLIP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 CYP1A1P04798 512 aaPredicted RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 HNRNPH1P31943 449 aaKnown RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 PRKCEQ02156 737 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 MKRN4PQ13434 485 aaPredicted RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 AUHQ13825 339 aaKnown RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 SPRED3Q2MJR0 410 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 CROCCP2Q86T23 111 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 ZNF677Q86XU0 584 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 NSUN6Q8TEA1 469 aaKnown RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 DDX27Q96GQ7 796 aaKnown RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 FAM81BQ96LP2 452 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 PLVAPQ9BX97 442 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 JPH1Q9HDC5 661 aaPredicted RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 STYXL1Q9Y6J8 313 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 NFASCO94856 1347 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 SMIM23A6NLE4 172 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 ACTR2P61160 394 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 DRP2Q13474 957 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 PSMD6Q15008 389 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 PPP1R7Q15435 360 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 C2CD6Q53TS8 623 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 LMBRD2Q68DH5 695 aaPredicted RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 LLGL2Q6P1M3 1020 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 CABS1Q96KC9 395 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 ATP6V0A4Q9HBG4 840 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 C1orf112Q9NSG2 853 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 SLC9A2Q9UBY0 812 aa16.96■□□□□ 0.31
HOXD3-202ENST00000410016 SEPT9Q9UHD8 586 aaPredicted RBP16.96■□□□□ 0.31
HOXD3-202ENST00000410016 VGLL3A8MV65 326 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 RASGRF2O14827 1237 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 ACO1P21399 889 aaKnown RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 SLC1A1P43005 524 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 CDR1P51861 262 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 CENPCQ03188 943 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 KRT17Q04695 432 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 NBPF12Q5TAG4 269 aaPredicted RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 GKAP1Q5VSY0 366 aaPredicted RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 TDRD10Q5VZ19 366 aaKnown RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 CRELD2Q6UXH1 353 aaPredicted RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 CPLX4Q7Z7G2 160 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 SUGP1Q8IWZ8 645 aaKnown RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 CACNA2D3Q8IZS8 1091 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 BICD1Q96G01 975 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 HAPLN2Q9GZV7 340 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 POLR3FQ9H1D9 316 aaPredicted RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 PTPRJQ12913 1337 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 MYBL1P10243 752 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 SLCO1A2P46721 670 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 NLRP11P59045 1033 aaKnown RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 SP4Q02446 784 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 CALCOCO2Q13137 446 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 SNX1Q13596 522 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 TRMT10CQ7L0Y3 403 aaKnown RBP16.95■□□□□ 0.3
HOXD3-202ENST00000410016 MON1BQ7L1V2 547 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 PHLDB2Q86SQ0 1253 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 CCDC13Q8IYE1 715 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 ATG4AQ8WYN0 398 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 KCNN1Q92952 543 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 IFT74Q96LB3 600 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 KIAA1586Q9HCI6 787 aa16.95■□□□□ 0.3
HOXD3-202ENST00000410016 WDR81Q562E7 1941 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 DNM1LO00429 736 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 VNN1O95497 513 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 HLA-DRAP01903 254 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 CFHP08603 1231 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 ITIH2P19823 946 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 OAZ1P54368 228 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 SPOPLQ6IQ16 392 aa16.94■□□□□ 0.3
HOXD3-202ENST00000410016 JPH2Q9BR39 696 aaPredicted RBP16.94■□□□□ 0.3
HOXD3-202ENST00000410016 DDX23Q9BUQ8 820 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms