RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 PSKH2Q96QS6 385 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 CITED2Q99967 270 aaPredicted RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 SEMA6BQ9H3T3 888 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 VPS18Q9P253 973 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 ANKRD26Q9UPS8 1709 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 CDC42BPGQ6DT37 1551 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 UGGT1Q9NYU2 1555 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 ABCC1P33527 1531 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 LOC100653049A0A140TA62 436 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TTC34A8MYJ7 566 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 FAM227AF5H4B4 570 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 B4GALT4O60513 344 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 KRT34O76011 436 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TMEM63AO94886 807 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 DLGAP3O95886 979 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 MYCP01106 439 aaPredicted RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 PTPREP23469 700 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ADSSP30520 456 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 GSTT1P30711 240 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 RPL9P32969 192 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TECP42680 631 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 DIO1P49895 249 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 RNASE9P60153 205 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 HAND2P61296 217 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TLE2Q04725 743 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 PTK2Q05397 1052 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TRPC3Q13507 836 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 CAMK2GQ13555 558 aaPredicted RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 NFE2L1Q14494 772 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 RBBP5Q15291 538 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TRIM71Q2Q1W2 868 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 CCDC40Q4G0X9 1142 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 FBXW10Q5XX13 1052 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 KANK2Q63ZY3 851 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 IQSEC1Q6DN90 963 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TXNDC11Q6PKC3 985 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 APOA5Q6Q788 366 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 C6orf89Q6UWU4 347 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 LSMEM2Q8N112 164 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 NIPA2Q8N8Q9 360 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 SMYD1Q8NB12 490 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 C3orf58Q8NDZ4 430 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 OR2W6PQ8NHA6 318 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 MIPOL1Q8TD10 442 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 OSBP2Q969R2 916 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 C19orf60Q96EN9 201 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TTC25Q96NG3 672 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 BCL7BQ9BQE9 202 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 SPXQ9BT56 116 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 UNC93B1Q9H1C4 597 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 NDFIP2Q9NV92 336 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 HSPBP1Q9NZL4 362 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ADD3Q9UEY8 706 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ADGRB2O60241 1585 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 FRMPD1Q5SYB0 1578 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TDRD9Q8NDG6 1382 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 A0A1W2PQH9 124 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 A0A1W2PRU2 124 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 OR6C65A6NJZ3 312 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ACOD1A6NK06 481 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ULK1O75385 1050 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ERAL1O75616 437 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 SLU7O95391 586 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 DLDP09622 509 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TMIGD3P0DMS9 266 aaPredicted RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 RFC1P35251 1148 aaPredicted RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ACAA2P42765 397 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ZNF460Q14592 562 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 C6orf132Q5T0Z8 1188 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 CENPPQ6IPU0 288 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 HHIPL2Q6UWX4 724 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 GRAMD2AQ8IUY3 354 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 RNF214Q8ND24 703 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TTC9Q92623 222 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 CDCA7LQ96GN5 454 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 MAELQ96JY0 434 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 ZMAT3Q9HA38 289 aaKnown RBP6.09□□□□□ -1.43
CNGA1-202ENST00000402813 VTA1Q9NP79 307 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 MOCS1Q9NZB8 636 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 RPS6KA6Q9UK32 745 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 TLR6Q9Y2C9 796 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 C15orf41Q9Y2V0 281 aa6.09□□□□□ -1.43
CNGA1-202ENST00000402813 POTEB3A0JP26 581 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 ARHGAP10A1A4S6 786 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 PRR5-ARHGAP8B1AHC4 643 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 SEC24BO95487 1268 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 CFBP00751 764 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 ZBTB48P10074 688 aaPredicted RBP6.08□□□□□ -1.44
CNGA1-202ENST00000402813 CHMLP26374 656 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 RGS2P41220 211 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 ACTR1AP61163 376 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 PRKCZQ05513 592 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 CETN1Q12798 172 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 COASYQ13057 564 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 DPYSL2Q16555 572 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 CYP27C1Q4G0S4 372 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 FBXO43Q4G163 708 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 CYP4A22Q5TCH4 519 aa6.08□□□□□ -1.44
CNGA1-202ENST00000402813 DARS2Q6PI48 645 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms