RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NOVP48745 357 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 TUBB8Q3ZCM7 444 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 SPOPLQ6IQ16 392 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 CYP4F22Q6NT55 531 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 DSTYKQ6XUX3 929 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 LBX2Q6XYB7 198 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.95□□□□□ -0.02
SCAF4-202ENST00000399804 BBOF1Q8ND07 529 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 TUT1Q9H6E5 874 aaKnown RBP14.95□□□□□ -0.02
SCAF4-202ENST00000399804 STRIP2Q9ULQ0 834 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 SPATA31C2B4DYI2 1134 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 ABL1P00519 1130 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 VTNP04004 478 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
SCAF4-202ENST00000399804 TMEM132DQ14C87 1099 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 CCDC63Q8NA47 563 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 TMEM161BQ8NDZ6 487 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 BAP1Q92560 729 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 WNK4Q96J92 1243 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 CALR3Q96L12 384 aaKnown RBP14.95□□□□□ -0.02
SCAF4-202ENST00000399804 OSGEPQ9NPF4 335 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 HOMER3Q9NSC5 361 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 INTUQ9ULD6 942 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 INPP5FQ9Y2H2 1132 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 TARSL2A2RTX5 802 aaKnown RBP14.95□□□□□ -0.02
SCAF4-202ENST00000399804 HUS1O60921 280 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 MYBL1P10243 752 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 CYP11B1P15538 503 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 SLC26A2P50443 739 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 GTF2BQ00403 316 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 PALM2Q8IXS6 379 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 MGARPQ8TDB4 240 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 HSPH1Q92598 858 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 NIF3L1Q9GZT8 377 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 BCAS3Q9H6U6 928 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 PODXLO00592 558 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 CUL2Q13617 745 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 SLC47A2Q86VL8 602 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 RHOT1Q8IXI2 618 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 MORC4Q8TE76 937 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 C1orf54Q8WWF1 131 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 CAPS2Q9BXY5 557 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 PARVAQ9NVD7 372 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ZNF286BP0CG31 522 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 RBP5P82980 135 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 BMT2Q1RMZ1 405 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 KIZQ2M2Z5 673 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 GNASQ5JWF2 1037 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ALS2CLQ60I27 953 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 APTXQ7Z2E3 356 aaKnown RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ARHGEF19Q8IW93 802 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 CTAGE3PQ8IX95 158 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ABI1Q8IZP0 508 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ANKS4BQ8N8V4 417 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ANKRD42Q8N9B4 389 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 LRRC15Q8TF66 581 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ZFYVE28Q9HCC9 887 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 AFG3L2Q9Y4W6 797 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 A0A087WZ62 844 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 PHF20L1A8MW92 1017 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 A8MXQ7 604 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 CTSHP09668 335 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 GTF2H1P32780 548 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 SLCO1A2P46721 670 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 CDR2Q01850 454 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ZNF484Q5JVG2 852 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 NME8Q8N427 588 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 OTUD6BQ8N6M0 293 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 KAT5Q92993 513 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 FDXACB1Q9BRP7 624 aaPredicted RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 ZNF214Q9UL59 606 aaPredicted RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 RCCD1A6NED2 376 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 DDX3XO00571 662 aaKnown RBP eCLIP14.94□□□□□ -0.024e-24■■■□□ 15.6
SCAF4-202ENST00000399804 ADCY3O60266 1144 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 EZRP15311 586 aaKnown RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 KCNA3P22001 575 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 HNRNPH2P55795 449 aaKnown RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 RNASELQ05823 741 aaKnown RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 CCDC137Q6PK04 289 aaKnown RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 CCNI2Q6ZMN8 369 aaPredicted RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 PNKPQ96T60 521 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.94□□□□□ -0.02
SCAF4-202ENST00000399804 SAMD15Q9P1V8 674 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 IP6K2Q9UHH9 426 aa14.94□□□□□ -0.02
SCAF4-202ENST00000399804 STRNO43815 780 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 TJP3O95049 919 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 CLTAP09496 248 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 SPIRE1Q08AE8 756 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 NNTQ13423 1086 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 PPP6R3Q5H9R7 873 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 FAM102AQ5T9C2 384 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 REPS2Q8NFH8 660 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 ZC3H15Q8WU90 426 aaKnown RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 TAF1DQ9H5J8 278 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
SCAF4-202ENST00000399804 MYH7P12883 1935 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 PIK3R2O00459 728 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 MCF2LO15068 1137 aa14.93□□□□□ -0.02
SCAF4-202ENST00000399804 LYPLA2O95372 231 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms