RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 LRRC19Q9H756 370 aa16.51■□□□□ 0.23
CPSF7-202ENST00000394888 EXTL3O43909 919 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 USP2O75604 605 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-202ENST00000394888 DHX9Q08211 1270 aaKnown RBP16.5■□□□□ 0.23
CPSF7-202ENST00000394888 HLTFQ14527 1009 aaKnown RBP eCLIP16.5■□□□□ 0.23
CPSF7-202ENST00000394888 OR5B17Q8NGF7 314 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 TMEM143Q96AN5 459 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 TRIM31Q9BZY9 425 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 TMEM51Q9NW97 253 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 SEPT9Q9UHD8 586 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-202ENST00000394888 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 CAND2O75155 1236 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 PSAPP07602 524 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 AGBL2Q5U5Z8 902 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 TMEM130Q8N3G9 435 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 JDP2Q8WYK2 163 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 TEX13BQ9BXU2 312 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 ATP6V0A4Q9HBG4 840 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 R3HDM2Q9Y2K5 976 aaKnown RBP16.5■□□□□ 0.23
CPSF7-202ENST00000394888 SNX24Q9Y343 169 aa16.5■□□□□ 0.23
CPSF7-202ENST00000394888 ATXN2Q99700 1313 aaKnown RBP16.5■□□□□ 0.23
CPSF7-202ENST00000394888 A0A0B4J269 797 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 TMEM110-MUSTN1A8MSY1 372 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 ZC3H11AO75152 810 aaKnown RBP eCLIP16.49■□□□□ 0.239e-7■■■□□ 16.7
CPSF7-202ENST00000394888 FARP2O94887 1054 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-202ENST00000394888 COILP38432 576 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-202ENST00000394888 CCDC26Q8TAB7 109 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 FMO2Q99518 471 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 UVRAGQ9P2Y5 699 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
CPSF7-202ENST00000394888 RRM1P23921 792 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 TMOD1P28289 359 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 KCNJ1P48048 391 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 ACOT2P49753 483 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 MYCBPAPQ8TBZ2 947 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 KAT2BQ92831 832 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 ZNF653Q96CK0 615 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 MTFR1LQ9H019 292 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 SEMA4AQ9H3S1 761 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 EXOC7Q9UPT5 735 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 NUB1Q9Y5A7 615 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 SRRM3A6NNA2 597 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-202ENST00000394888 TCF4P15884 667 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 CHRNA3P32297 505 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 CPA5Q8WXQ8 436 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 NT5C1BQ96P26 610 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 CHST7Q9NS84 486 aa16.49■□□□□ 0.23
CPSF7-202ENST00000394888 UTP11Q9Y3A2 253 aaKnown RBP16.49■□□□□ 0.23
CPSF7-202ENST00000394888 PDCD11Q14690 1871 aaKnown RBP16.48■□□□□ 0.23
CPSF7-202ENST00000394888 HNRNPDLO14979 420 aaKnown RBP16.48■□□□□ 0.23
CPSF7-202ENST00000394888 CPP00450 1065 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 UBA1P22314 1058 aaKnown RBP16.48■□□□□ 0.23
CPSF7-202ENST00000394888 SLC20A2Q08357 652 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 ADCY2Q08462 1091 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 CAPSQ13938 189 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 TMEM63BQ5T3F8 832 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 CCDC137Q6PK04 289 aaKnown RBP16.48■□□□□ 0.23
CPSF7-202ENST00000394888 MORC4Q8TE76 937 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 ATP6V0A1Q93050 837 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
CPSF7-202ENST00000394888 TRAPPC3O43617 180 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 HLA-DRAP01903 254 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 USP8P40818 1118 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 SMTNP53814 917 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 NOMO3P69849 1222 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 MOGSQ13724 837 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 MCPH1Q8NEM0 835 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 PABPC3Q9H361 631 aaKnown RBP16.48■□□□□ 0.23
CPSF7-202ENST00000394888 ATP8A1Q9Y2Q0 1164 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 C19orf81C9J6K1 198 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 STAM2O75886 525 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 ARIH2O95376 493 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 OATP04181 439 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 FNTAP49354 379 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 TAS2R40P59535 323 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 MTERF2Q49AM1 385 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 XKR3Q5GH77 459 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 LBX2Q6XYB7 198 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 PACS2Q86VP3 889 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 ZNF473Q8WTR7 871 aaKnown RBP16.48■□□□□ 0.23
CPSF7-202ENST00000394888 ATXN2LQ8WWM7 1075 aaKnown RBP16.48■□□□□ 0.23
CPSF7-202ENST00000394888 PNMA2Q9UL42 364 aa16.48■□□□□ 0.23
CPSF7-202ENST00000394888 PLXNB2O15031 1838 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 CLDN3O15551 220 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 GGPS1O95749 300 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 TNFSF9P41273 254 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 ALDH5A1P51649 535 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-202ENST00000394888 SP4Q02446 784 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 OTUD6AQ7L8S5 288 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 C5orf60A6NFR6 353 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 PDE6CP51160 858 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 SEZ6Q53EL9 994 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 JPH2Q9BR39 696 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-202ENST00000394888 GPRC5DQ9NZD1 345 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 MSCO60682 206 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms