RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PAX4O43316 350 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 SGTAO43765 313 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 ALDH1A2O94788 518 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 IFIT2P09913 472 aaKnown RBP7□□□□□ -1.29
RNU4-39P-201ENST00000362455 MED14OSP0DP75 135 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 IL12RB1P42701 662 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 RRADP55042 308 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 CDC42EP1Q00587 391 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 MESP2Q0VG99 397 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 OS9Q13438 667 aaPredicted RBP7□□□□□ -1.29
RNU4-39P-201ENST00000362455 ANO6Q4KMQ2 910 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 THEMIS2Q5TEJ8 643 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 PLA2G15Q8NCC3 412 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 KLHDC4Q8TBB5 520 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 ZNF480Q8WV37 535 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 AJUBAQ96IF1 538 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 CARD11Q9BXL7 1154 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 TMEM168Q9H0V1 697 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 MANSC1Q9H8J5 431 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 ING3Q9NXR8 418 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 CTDP1Q9Y5B0 961 aaPredicted RBP7□□□□□ -1.29
RNU4-39P-201ENST00000362455 COMMD10Q9Y6G5 202 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 CROCC2H7BZ55 1655 aa7□□□□□ -1.29
RNU4-39P-201ENST00000362455 SLC16A6O15403 523 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 CYP1A1P04798 512 aaPredicted RBP6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 ZNF888P0CJ79 500 aaPredicted RBP6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 CSF2RBP32927 897 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 AGFG1P52594 562 aaKnown RBP6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 PER3P56645 1201 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 FAM193AP78312 1265 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 TARDBPQ13148 414 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 ZNF827Q17R98 1081 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 KIAA0753Q2KHM9 967 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 CCDC157Q569K6 752 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 GPR155Q7Z3F1 870 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 DAAM2Q86T65 1068 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 PQLC1Q8N2U9 271 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 GCDHQ92947 438 aaPredicted RBP6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 CLPTM1LQ96KA5 538 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 DMRTA2Q96SC8 542 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 PDCD2LQ9BRP1 358 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 C14orf93Q9H972 538 aaKnown RBP6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 BCO1Q9HAY6 547 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 TRPS1Q9UHF7 1281 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 CNOT6Q9ULM6 557 aaKnown RBP6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 L1RE1Q9UN81 338 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 RNF114Q9Y508 228 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 KCTD3Q9Y597 815 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 RBM8AQ9Y5S9 174 aaKnown RBP6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 ASXL1Q8IXJ9 1541 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 DCCP43146 1447 aa6.99□□□□□ -1.29
RNU4-39P-201ENST00000362455 SH3D21A4FU49 640 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 CAPN8A6NHC0 703 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 SYN1P17600 705 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 SREBF1P36956 1147 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 KIR2DL3P43628 341 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 SARSP49591 514 aaKnown RBP6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 WNT3AP56704 352 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 CAP1Q01518 475 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 NOGQ13253 232 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 USP10Q14694 798 aaKnown RBP6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 AGBL4Q5VU57 503 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 MCTP2Q6DN12 878 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 SWSAP1Q6NVH7 229 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 DARS2Q6PI48 645 aaKnown RBP6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 ATG14Q6ZNE5 492 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 ADGRG2Q8IZP9 1017 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 LILRA3Q8N6C8 439 aaPredicted RBP6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 OR7D4Q8NG98 312 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 CCHCR1Q8TD31 782 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 MORC4Q8TE76 937 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 SLC7A6OSQ96CW6 309 aaPredicted RBP6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 CDK5RAP3Q96JB5 506 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 SAMD11Q96NU1 681 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 UHRF1Q96T88 793 aaPredicted RBP6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 OR10A2Q9H208 303 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 BHMT2Q9H2M3 363 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 GPRC5DQ9NZD1 345 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 PCDHGB6Q9Y5F9 930 aa6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 CHD2O14647 1828 aaKnown RBP6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.98□□□□□ -1.29
RNU4-39P-201ENST00000362455 ROCK1Q13464 1354 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 TRPM2O94759 1503 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 A0A1B0GTL3 188 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 ADCY6O43306 1168 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 FARP2O94887 1054 aaPredicted RBP6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 KRT1P04264 644 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 SLC5A1P13866 664 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 HK3P52790 923 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 SEMA5AQ13591 1074 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 CNN3Q15417 329 aaKnown RBP6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 RNF220Q5VTB9 566 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 RSPH3Q86UC2 560 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 COL23A1Q86Y22 540 aaPredicted RBP6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 ZDHHC14Q8IZN3 488 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 TXNDC5Q8NBS9 432 aaKnown RBP6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 C3orf20Q8ND61 904 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 PLBD2Q8NHP8 589 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 LPPQ93052 612 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 TMX3Q96JJ7 454 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms