RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 MRPS25P82663 173 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 CUL2Q13617 745 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 LAMC2Q13753 1193 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 PPP1R2P3Q6NXS1 205 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 TRIM72Q6ZMU5 477 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ARMCX2Q7L311 632 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 TRIM50Q86XT4 487 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 WDR49Q8IV35 697 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ABRAQ8N0Z2 381 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 RNF149Q8NC42 400 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ZNF564Q8TBZ8 553 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 TCHPQ9BT92 498 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 EFCC1Q9HA90 598 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 VTA1Q9NP79 307 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ACP6Q9NPH0 428 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ERAP1Q9NZ08 941 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 PTPRJQ12913 1337 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ANK1P16157 1881 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 GOLGA6L10A0A0M3HER8 536 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 MYBL1P10243 752 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 CYP2C8P10632 490 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 HSPA6P17066 643 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 GCLCP48506 637 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 GTF2A2P52657 109 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 MCL1Q07820 350 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 CUL1Q13616 776 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ZNF792Q3KQV3 632 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ZNF484Q5JVG2 852 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ZBTB41Q5SVQ8 909 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 MAATS1Q7Z4T9 603 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 WHAMMQ8TF30 809 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 RNPC3Q96LT9 517 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 NUP85Q9BW27 656 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 IMPG2Q9BZV3 1241 aa19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 ZCCHC17Q9NP64 241 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 AVENQ9NQS1 362 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-203ENST00000359895 SART1O43290 800 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 STRNO43815 780 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 GH1P01241 217 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 FGGP02679 453 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 CLTAP09496 248 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 MESDQ14696 234 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 DCAF12L1Q5VU92 463 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 ALS2CLQ60I27 953 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 ZNF467Q7Z7K2 595 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 LRRC71Q8N4P6 559 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 CASKIN2Q8WXE0 1202 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 COPS5Q92905 334 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 ZSWIM1Q9BR11 485 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 AP1M1Q9BXS5 423 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 CNTN6Q9UQ52 1028 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 CLEC11AQ9Y240 323 aa19.6■□□□□ 0.73
PDLIM7-203ENST00000359895 RBM47A0AV96 593 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 GOLGA6BA6NDN3 693 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 BHMG1C9JSJ3 638 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 PDHXO00330 501 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 KIF3CO14782 793 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 FAM189A1O60320 539 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 POTEJP0CG39 1038 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 HARSP12081 509 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 UNGP13051 313 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 ACO1P21399 889 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 CTNNA2P26232 953 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 CARSP49589 748 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 FKBP1BP68106 108 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 NOP14P78316 857 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 ARHGAP1Q07960 439 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 NCOA4Q13772 614 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 TSHZ1Q6ZSZ6 1077 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 ANKRD23Q86SG2 305 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 RHPN2Q8IUC4 686 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 GDAP1L1Q96MZ0 367 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 HINFPQ9BQA5 517 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 PDGFCQ9NRA1 345 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 MORF4L1Q9UBU8 362 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 CNOT8Q9UFF9 292 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 PCDHB4Q9Y5E5 795 aa19.59■□□□□ 0.73
PDLIM7-203ENST00000359895 CCDC66A2RUB6 948 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 TMEM110-MUSTN1A8MSY1 372 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 ACKR2O00590 384 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 COMTP21964 271 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 POU5F1BQ06416 359 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 EFCAB12Q6NXP0 572 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 MPZL3Q6UWV2 235 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 ZBTB33Q86T24 672 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 MREGQ8N565 214 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 OR5B17Q8NGF7 314 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 IFT81Q8WYA0 676 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 EXOC4Q96A65 974 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 NFKBIZQ9BYH8 718 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 FZD8Q9H461 694 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 VPS18Q9P253 973 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 CPSF3Q9UKF6 684 aaKnown RBP19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 NFU1Q9UMS0 254 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 IVNS1ABPQ9Y6Y0 642 aa19.58■□□□□ 0.73
PDLIM7-203ENST00000359895 COL1A2P08123 1366 aa19.58■□□□□ 0.72
PDLIM7-203ENST00000359895 CCL15-CCL14A0A0B4J2E2 113 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 ABLIM1O14639 778 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 MAGEB2O15479 319 aa19.57■□□□□ 0.72
PDLIM7-203ENST00000359895 CYP1A1P04798 512 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms