RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 STIM1Q13586 685 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 PKN1Q16512 942 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 RNF219Q5W0B1 726 aaPredicted RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TSHZ1Q6ZSZ6 1077 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 FAM126BQ8IXS8 530 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 KREMEN2Q8NCW0 462 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CNNM3Q8NE01 707 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 NSUN7Q8NE18 718 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 OR6B3Q8NGW1 331 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 PRPF31Q8WWY3 499 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ZNF396Q96N95 335 aaPredicted RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 C1orf112Q9NSG2 853 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 SMPD4Q9NXE4 827 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 EXOC7Q9UPT5 735 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 MYH9P35579 1960 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ZMYM6O95789 1325 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ALPK3Q96L96 1907 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 SPTBN4Q9H254 2564 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 NYNRINQ9P2P1 1898 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 PI4K2BG5E9Z4 385 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 PRPF40AO75400 957 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ARIH2O95376 493 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TDP2O95551 362 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 P4HBP07237 508 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 XPAP23025 273 aaPredicted RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CDC25AP30304 524 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 GUCY1A2P33402 732 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TRAPPC10P48553 1259 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 EPHB3P54753 998 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TNNC1P63316 161 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CSTF1Q05048 431 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 EHHADHQ08426 723 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CETN1Q12798 172 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ANO4Q32M45 955 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TTC38Q5R3I4 469 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 GPBP1Q86WP2 473 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 NELFCDQ8IXH7 590 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 USP38Q8NB14 1042 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 MCPH1Q8NEM0 835 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CACTINQ8WUQ7 758 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ACAP3Q96P50 834 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 PHF20Q9BVI0 1012 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 IRF2BPLQ9H1B7 796 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ADAM7Q9H2U9 754 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 IL17RBQ9NRM6 502 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TFIP11Q9UBB9 837 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CUBNO60494 3623 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 MTCL1Q9Y4B5 1905 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 WDR19Q8NEZ3 1342 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ATRNL1Q5VV63 1379 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 LINC01553A4QN01 128 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TMEM150BA6NC51 233 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 GLUD2P49448 558 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CYP2J2P51589 502 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 KCNC4Q03721 635 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ELAVL2Q12926 359 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ELF2Q15723 593 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ACCSLQ4AC99 568 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 FAM173BQ6P4H8 233 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TMTC3Q6ZXV5 915 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ANKRD20A12PQ8NF67 263 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 PHOSPHO2Q8TCD6 241 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CRYGNQ8WXF5 182 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 TMEM117Q9H0C3 514 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CYP26B1Q9NR63 512 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 YBX2Q9Y2T7 364 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 NOC2LQ9Y3T9 749 aaKnown RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 ATP6V1DQ9Y5K8 247 aa4.11□□□□□ -1.75
SMC1B-201ENST00000357450 KIF26AQ9ULI4 1882 aaPredicted RBP4.11□□□□□ -1.75
SMC1B-201ENST00000357450 CCDC195A0A1B0GUA6 201 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 BTBD18B2RXH4 712 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 CAPN9O14815 690 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 EXOC3O60645 756 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 HMBSP08397 361 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 ECHS1P30084 290 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 GRIK1P39086 918 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 PXNP49023 591 aaPredicted RBP4.1□□□□□ -1.75
SMC1B-201ENST00000357450 PPP2R3AQ06190 1150 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 GABPAQ06546 454 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 EMC2Q15006 297 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 USP41Q3LFD5 358 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 PUS10Q3MIT2 529 aaKnown RBP4.1□□□□□ -1.75
SMC1B-201ENST00000357450 CCDC40Q4G0X9 1142 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 KIAA1324Q6UXG2 1013 aaKnown RBP4.1□□□□□ -1.75
SMC1B-201ENST00000357450 HDDC3Q8N4P3 179 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 SRBD1Q8N5C6 995 aaKnown RBP4.1□□□□□ -1.75
SMC1B-201ENST00000357450 BEST2Q8NFU1 509 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 SLC7A14Q8TBB6 771 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 CCDC97Q96F63 343 aaPredicted RBP4.1□□□□□ -1.75
SMC1B-201ENST00000357450 ZSCAN31Q96LW9 406 aaPredicted RBP4.1□□□□□ -1.75
SMC1B-201ENST00000357450 MSTO1Q9BUK6 570 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 RANBP17Q9H2T7 1088 aaKnown RBP4.1□□□□□ -1.75
SMC1B-201ENST00000357450 EPHX3Q9H6B9 360 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 DOLKQ9UPQ8 538 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 INVSQ9Y283 1065 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 SH3BP1Q9Y3L3 701 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 ZNF462Q96JM2 2506 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 GOLGA6CA6NDK9 693 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 GOLGA6BA6NDN3 693 aa4.1□□□□□ -1.75
SMC1B-201ENST00000357450 TBC1D3BA6NDS4 549 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms