RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SLC12A4Q9UP95 1085 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 DNM3Q9UQ16 869 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 A0A1W2PP64 1363 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ERCC6L2Q5T890 1561 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 UGGT1Q9NYU2 1555 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 GCNT3O95395 438 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 FOSP01100 380 aaPredicted RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 IFNAR1P17181 557 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 CIITAP33076 1130 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 COPB2P35606 906 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 FAM83BQ5T0W9 1011 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 STX19Q8N4C7 294 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 DHX38Q92620 1227 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 MYLK2Q9H1R3 596 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 UVRAGQ9P2Y5 699 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 HEY2Q9UBP5 337 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ZNF232Q9UNY5 417 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 KLHL41O60662 606 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PORP16435 677 aaPredicted RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 EIF4BP23588 611 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 BAG6P46379 1132 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 BPIFB4P59827 614 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 NCALDP61601 193 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 FMR1Q06787 632 aaKnown RBP eCLIP5.3□□□□□ -1.56
SKP1-202ENST00000353411 WASHC5Q12768 1159 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 POLA2Q14181 598 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 IYDQ6PHW0 289 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 MTDHQ86UE4 582 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 BLIDQ8IZY5 108 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ZNF786Q8N393 782 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 FLAD1Q8NFF5 587 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 BRIP1Q9BX63 1249 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 OSBPL6Q9BZF3 934 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 GOLGA8MH3BSY2 632 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 NFIBO00712 420 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PRCPP42785 496 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 SLC1A4P43007 532 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 IST1P53990 364 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 OCRLQ01968 901 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ARMCX4Q5H9R4 360 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 TMC3Q7Z5M5 1100 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ZNF654Q8IZM8 581 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 OR9Q1Q8NGQ5 310 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 RIN3Q8TB24 985 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 MRPL47Q9HD33 250 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 GCNT4Q9P109 453 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 SPEF1Q9Y4P9 236 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 DNM1LO00429 736 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 FOSL1P15407 271 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ZNF24P17028 368 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 FLT3P36888 993 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 TXKP42681 527 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 GIMAP8Q8ND71 665 aaPredicted RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 FNIP1Q8TF40 1166 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 CYGBQ8WWM9 190 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ANKS1AQ92625 1134 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ITPKCQ96DU7 683 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 TBC1D10AQ9BXI6 508 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 CEP44Q9C0F1 390 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 MAF1Q9H063 256 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 PHF24Q9UPV7 400 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 COQ6Q9Y2Z9 468 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 TM9SF1O15321 606 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 SEC24DO94855 1032 aaPredicted RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 PARNO95453 639 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 GLI1P08151 1106 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 SOX6P35712 828 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 ERVK-24P63145 666 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 EFTUD2Q15029 972 aaKnown RBP eCLIP5.3□□□□□ -1.567e-8■■■□□ 18.5
SKP1-202ENST00000353411 CLVS1Q8IUQ0 354 aaPredicted RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 IARS2Q9NSE4 1012 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 DDX25Q9UHL0 483 aaKnown RBP5.3□□□□□ -1.56
SKP1-202ENST00000353411 ZNF652Q9Y2D9 606 aa5.3□□□□□ -1.56
SKP1-202ENST00000353411 CENPXA8MT69 81 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 LYNP07948 512 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 KITP10721 976 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 ETS2P15036 469 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 NR2F2P24468 414 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 CDCA2Q69YH5 1023 aaPredicted RBP5.29□□□□□ -1.56
SKP1-202ENST00000353411 TMEM53Q6P2H8 277 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 SPICE1Q8N0Z3 855 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 TSPAN14Q8NG11 270 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 LARP4BQ92615 738 aaKnown RBP5.29□□□□□ -1.56
SKP1-202ENST00000353411 MXD3Q9BW11 206 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 CHID1Q9BWS9 393 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 RSPH9Q9H1X1 276 aaPredicted RBP5.29□□□□□ -1.56
SKP1-202ENST00000353411 PLA2R1Q13018 1463 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 PCDH11YQ9BZA8 1340 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.29□□□□□ -1.564e-13■■□□□ 11.5
SKP1-202ENST00000353411 TRIM24O15164 1050 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 ASLP04424 464 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 LRPAP1P30533 357 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 TBC1D9BQ66K14 1250 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 HEATR4Q86WZ0 1026 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 JAMLQ86YT9 394 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 JDP2Q8WYK2 163 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 FANCEQ9HB96 536 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 CCDC59Q9P031 241 aaKnown RBP5.29□□□□□ -1.56
SKP1-202ENST00000353411 MAGEB6P1A0A0J9YX57 407 aa5.29□□□□□ -1.56
SKP1-202ENST00000353411 PGM3O95394 542 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms