RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 TTC4O95801 387 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 CYP2D6P10635 497 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 KRT15P19012 456 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 CHRNA3P32297 505 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 PPP1R2P41236 205 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 KRT17Q04695 432 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 SFT2D3Q587I9 215 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 FAM26FQ5R3K3 315 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 ZNF746Q6NUN9 644 aaPredicted RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 KLF6Q99612 283 aaPredicted RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 TLE6Q9H808 572 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 NDE1Q9NXR1 346 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 ZNF212Q9UDV6 495 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 USP17L12C9JPN9 530 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 USP17L21D6R901 530 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 H3BRJ5 948 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 TFPTP0C1Z6 253 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 ESRRAP11474 423 aaPredicted RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 COILP38432 576 aaPredicted RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 RCAN1P53805 252 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 DRG2P55039 364 aaKnown RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 PKN2Q16513 984 aaKnown RBP17.22■□□□□ 0.35
MBD1-204ENST00000347968 ECM1Q16610 540 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 SUSD4Q5VX71 490 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 VPS36Q86VN1 386 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 RIN3Q8TB24 985 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 PYDC1Q8WXC3 89 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 IKZF4Q9H2S9 585 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 VAT1LQ9HCJ6 419 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 PCDH18Q9HCL0 1135 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 PCDHGB4Q9UN71 923 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 PCDHGB5Q9Y5G0 923 aa17.22■□□□□ 0.35
MBD1-204ENST00000347968 GOLGA8RI6L899 631 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 DNAJC6O75061 913 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 NR2F2P24468 414 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 ITGA8P53708 1063 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 TRIM28Q13263 835 aaKnown RBP17.21■□□□□ 0.35
MBD1-204ENST00000347968 MAPK6Q16659 721 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 KLHL35Q6PF15 583 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 RIPOR1Q6ZS17 1223 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 UBA5Q9GZZ9 404 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 LIN28AQ9H9Z2 209 aaKnown RBP17.21■□□□□ 0.35
MBD1-204ENST00000347968 TMEM260Q9NX78 707 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 PARP2Q9UGN5 583 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 TRAFD1O14545 582 aaPredicted RBP17.21■□□□□ 0.35
MBD1-204ENST00000347968 LSM1O15116 133 aaKnown RBP17.21■□□□□ 0.35
MBD1-204ENST00000347968 VILLO15195 856 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 COL6A2P12110 1019 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 OXCT1P55809 520 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 NCOA4Q13772 614 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 PPP2R5BQ15173 497 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 SLC35G1Q2M3R5 365 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 C10orf76Q5T2E6 689 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 TRMT10CQ7L0Y3 403 aaKnown RBP17.21■□□□□ 0.35
MBD1-204ENST00000347968 RFFLQ8WZ73 363 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 ABHD8Q96I13 439 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 STK33Q9BYT3 514 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 GRIP2Q9C0E4 1043 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 USP29Q9HBJ7 922 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 WNK3Q9BYP7 1800 aa17.21■□□□□ 0.35
MBD1-204ENST00000347968 SRCAPQ6ZRS2 3230 aa17.21■□□□□ 0.34
MBD1-204ENST00000347968 PODXLO00592 558 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 HOXD12P35452 270 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 KLC3Q6P597 504 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 BTBD7Q9P203 1132 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 A0A1W2PPM1 405 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 LRRN2O75325 713 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 ARFIP2P53365 341 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 AQP4P55087 323 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 CTSWP56202 376 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 PPATQ06203 517 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 MTM1Q13496 603 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 SPARCL1Q14515 664 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 KLHDC10Q6PID8 442 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 TTC7AQ9ULT0 858 aaPredicted RBP17.2■□□□□ 0.34
MBD1-204ENST00000347968 TRAF3IP3Q9Y228 551 aa17.2■□□□□ 0.34
MBD1-204ENST00000347968 CYP26A1O43174 497 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 RXRBP28702 533 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 KDSRQ06136 332 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 ARHGAP44Q17R89 818 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 HERC4Q5GLZ8 1057 aaPredicted RBP17.19■□□□□ 0.34
MBD1-204ENST00000347968 DAB2IPQ5VWQ8 1189 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 SMYD1Q8NB12 490 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 THTPAQ9BU02 230 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 TRABDQ9H4I3 376 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 GCNT4Q9P109 453 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 ANGPTL2Q9UKU9 493 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 ABCB11O95342 1321 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 CLDN3O15551 220 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 NDUFB5O43674 189 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 ENO1P06733 434 aaKnown RBP17.19■□□□□ 0.34
MBD1-204ENST00000347968 EMP3P54852 163 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 TMEM53Q6P2H8 277 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 LVRNQ6Q4G3 990 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 LINC00116Q8NCU8 138 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 GAB3Q8WWW8 586 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 USP6NLQ92738 828 aa17.19■□□□□ 0.34
MBD1-204ENST00000347968 NSL1Q96IY1 281 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms