RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MED7O43513 233 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 IMPDH2P12268 514 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 USP11P51784 963 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 COL23A1Q86Y22 540 aaPredicted RBP16.98■□□□□ 0.31
NPHP3-201ENST00000337331 ZNF34Q8IZ26 560 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 IFT122Q9HBG6 1241 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 UBAP1Q9NZ09 502 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 DEPDC5O75140 1603 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 ZC3H13Q5T200 1668 aaKnown RBP16.98■□□□□ 0.31
NPHP3-201ENST00000337331 SSU72P8A0A1W2PR75 194 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 KDSRQ06136 332 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 ANO7Q6IWH7 933 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 TMEM270Q6UE05 265 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 DNAAF5Q86Y56 855 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 ZNF564Q8TBZ8 553 aaPredicted RBP16.98■□□□□ 0.31
NPHP3-201ENST00000337331 RFFLQ8WZ73 363 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 MASTLQ96GX5 879 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 SYT15Q9BQS2 421 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 FAM213AQ9BRX8 229 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 PACSIN1Q9BY11 444 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 SEL1LQ9UBV2 794 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 DENND3A2RUS2 1198 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 WDR64B1ANS9 1081 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 PLS3P13797 630 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 PBX1P40424 430 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 ARL4AP40617 200 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 CDO1Q16878 200 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 MTHFD1LQ6UB35 978 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 MCPH1Q8NEM0 835 aa16.98■□□□□ 0.31
NPHP3-201ENST00000337331 MYMKA6NI61 221 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 MLH1P40692 756 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 GJA8P48165 433 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 ESRRGP62508 458 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 CBX3Q13185 183 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 SLFN12LQ6IEE8 588 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 CCDC137Q6PK04 289 aaKnown RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 LRRC74BQ6ZQY2 392 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 SEPT12Q8IYM1 358 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 TMEM35BQ8NCS4 154 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 MCUQ8NE86 351 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 EIF2AK1Q9BQI3 630 aaKnown RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 INTS2Q9H0H0 1204 aaKnown RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 SLC38A10Q9HBR0 1119 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 A0A087X0T9 212 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 E7ENQ6 273 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 TOM1L1O75674 476 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 ZBED1O96006 694 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 FAM228BP0C875 321 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 NMT1P30419 496 aaKnown RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 PMS1P54277 932 aaKnown RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 DSG1Q02413 1049 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 TRIM59Q8IWR1 403 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 ICA1LQ8NDH6 482 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 FAM187AA6NFU0 413 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 TJP3O95049 919 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 PSMA2P25787 234 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 QARSP47897 775 aaKnown RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 GPSM2P81274 684 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 DAB2IPQ5VWQ8 1189 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 JAMLQ86YT9 394 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 GIMAP8Q8ND71 665 aaPredicted RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 UCMAQ8WVF2 138 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 THTPAQ9BU02 230 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 RAVER2Q9HCJ3 691 aaKnown RBP16.97■□□□□ 0.31
NPHP3-201ENST00000337331 MTMR4Q9NYA4 1195 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 ABCB11O95342 1321 aa16.97■□□□□ 0.31
NPHP3-201ENST00000337331 LRRC10BA6NIK2 292 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 NFIXQ14938 502 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 KYNUQ16719 465 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 KRT27Q7Z3Y8 459 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 HEXIM2Q96MH2 286 aaKnown RBP16.96■□□□□ 0.31
NPHP3-201ENST00000337331 LXNQ9BS40 222 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 NUP85Q9BW27 656 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 NPHP3-ACAD11A0A0J9YXS1 232 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 CLDN3O15551 220 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 UNC5CO95185 931 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 MPP3Q13368 585 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 CYTH1Q15438 398 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 SBK1Q52WX2 424 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 LZICQ8WZA0 190 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.31
NPHP3-201ENST00000337331 C7orf25Q9BPX7 421 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 TBC1D10AQ9BXI6 508 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 AGXT2Q9BYV1 514 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 EMSYQ7Z589 1322 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 A0A087X0B3 334 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 XPOTO43592 962 aaKnown RBP16.96■□□□□ 0.31
NPHP3-201ENST00000337331 P4HBP07237 508 aaKnown RBP16.96■□□□□ 0.31
NPHP3-201ENST00000337331 TNFRSF8P28908 595 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 CHRNA3P32297 505 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 FLT3P36888 993 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 MAGEA8P43361 318 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 TROAPQ12815 778 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 PPP6R3Q5H9R7 873 aaPredicted RBP16.96■□□□□ 0.31
NPHP3-201ENST00000337331 C4orf33Q8N1A6 199 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 RIBC1Q8N443 379 aaPredicted RBP16.96■□□□□ 0.31
NPHP3-201ENST00000337331 MYLK2Q9H1R3 596 aa16.96■□□□□ 0.31
NPHP3-201ENST00000337331 CCDC68Q9H2F9 335 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms