RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 SETD4Q9NVD3 440 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 TRIM33Q9UPN9 1127 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 COL11A1P12107 1806 aaPredicted RBP11.07□□□□□ -0.64
ABCF1-201ENST00000326195 DNAJC25-GNG10A0A024R161 153 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 GOLGA6L10A6NI86 522 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 WDR64B1ANS9 1081 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 AHCYL1O43865 530 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 SHBGP04278 402 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 PRKCEQ02156 737 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 MYCT1Q8N699 235 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 ARFGAP2Q8N6H7 521 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 SHCBP1Q8NEM2 672 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 TRPV1Q8NER1 839 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 EZH1Q92800 747 aaPredicted RBP11.07□□□□□ -0.64
ABCF1-201ENST00000326195 OSBPL1AQ9BXW6 950 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 ZFATQ9P243 1243 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 PNMA2Q9UL42 364 aa11.07□□□□□ -0.64
ABCF1-201ENST00000326195 DHX15O43143 795 aaKnown RBP11.06□□□□□ -0.64
ABCF1-201ENST00000326195 KRT16P08779 473 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 FAM163BP0C2L3 166 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 ALADP13716 330 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 LRRC63Q05C16 580 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 GFPT1Q06210 699 aaPredicted RBP11.06□□□□□ -0.64
ABCF1-201ENST00000326195 KLHL30Q0D2K2 578 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 LAMB3Q13751 1172 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 TRIM74Q86UV6 250 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 TRIM73Q86UV7 250 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 GTF3C2Q8WUA4 911 aaPredicted RBP11.06□□□□□ -0.64
ABCF1-201ENST00000326195 ZNF317Q96PQ6 595 aaPredicted RBP11.06□□□□□ -0.64
ABCF1-201ENST00000326195 IWS1Q96ST2 819 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 UNC93B1Q9H1C4 597 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 RNF19AQ9NV58 838 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 ZMYND8Q9ULU4 1186 aaPredicted RBP11.06□□□□□ -0.64
ABCF1-201ENST00000326195 MYH7BA7E2Y1 1941 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 PVALEFA0A1B0GWK0 134 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 LRRC53A6NM62 1247 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 SPATA31C2B4DYI2 1134 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 ZNF862O60290 1169 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 PAEPP09466 180 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 QARSP47897 775 aaKnown RBP11.06□□□□□ -0.64
ABCF1-201ENST00000326195 PTPROQ16827 1216 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 CFAP221Q4G0U5 840 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 CCDC197Q8NCU1 140 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 CHMP6Q96FZ7 201 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 HHIPL1Q96JK4 782 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 NLRP4Q96MN2 994 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 DUSP9Q99956 384 aaKnown RBP11.06□□□□□ -0.64
ABCF1-201ENST00000326195 ELAC2Q9BQ52 826 aaKnown RBP11.06□□□□□ -0.64
ABCF1-201ENST00000326195 RUSC1Q9BVN2 902 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 TBC1D22BQ9NU19 505 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 FBXL5Q9UKA1 691 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 VAV3Q9UKW4 847 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 NOD1Q9Y239 953 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 SLC45A1Q9Y2W3 748 aa11.06□□□□□ -0.64
ABCF1-201ENST00000326195 KLRC4O43908 158 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 SMIM24O75264 130 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 FARP2O94887 1054 aaPredicted RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 SPATA31C1P0DKV0 1188 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 RARBP10826 455 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 PYGBP11216 843 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 YWHABP31946 246 aaKnown RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 CLCN3P51790 818 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 ADAM9Q13443 819 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 Q4G0T1 1027 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 MORN1Q5T089 497 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 TAPT1Q6NXT6 567 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 GUF1Q8N442 669 aaKnown RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 WHAMMQ8TF30 809 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 UBLCP1Q8WVY7 318 aaPredicted RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 SEPT1Q8WYJ6 367 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 TSC22D3Q99576 134 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 XPNPEP3Q9NQH7 507 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 STK38LQ9Y2H1 464 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 COL4A3BPQ9Y5P4 624 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 KDM3AQ9Y4C1 1321 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 CAPN15O75808 1086 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 UBOX5O94941 541 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 CYP3A4P08684 503 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 RARAP10276 462 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 NQO1P15559 274 aaKnown RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 CIITAP33076 1130 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 RANBP1P43487 201 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 ERMARDQ5T6L9 678 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 LRRC34Q8IZ02 419 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 SLC17A8Q8NDX2 589 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 RAD54LQ92698 747 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 XPO6Q96QU8 1125 aaKnown RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 SYT15Q9BQS2 421 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 GREB1LQ9C091 1923 aaPredicted RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 GH1P01241 217 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 PSAPP07602 524 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 NEFHP12036 1026 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 POLGP54098 1239 aaPredicted RBP11.05□□□□□ -0.64
ABCF1-201ENST00000326195 NCALDP61601 193 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 ASIC2Q16515 512 aa11.05□□□□□ -0.64
ABCF1-201ENST00000326195 ANO7Q6IWH7 933 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms