RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 FAM13CQ8NE31 585 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 HSPBAP1Q96EW2 488 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 SMC6Q96SB8 1091 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 CCSER1Q9C0I3 900 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 THAP9Q9H5L6 903 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 FAM114A2Q9NRY5 505 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 CTTNBP2NLQ9P2B4 639 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 ARHGAP20Q9P2F6 1191 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 ZMAT5Q9UDW3 170 aaKnown RBP10.96□□□□□ -0.65
SF3B2-201ENST00000322535 SEC63Q9UGP8 760 aaKnown RBP10.96□□□□□ -0.65
SF3B2-201ENST00000322535 ROBO3Q96MS0 1386 aa10.96□□□□□ -0.65
SF3B2-201ENST00000322535 LCA5LO95447 670 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 PDE1BQ01064 536 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 ARID5AQ03989 594 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 C1orf228Q6PIY5 440 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 TRIM67Q6ZTA4 783 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 ESX1Q8N693 406 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 ACER1Q8TDN7 264 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 SYT17Q9BSW7 474 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 RNF26Q9BY78 433 aaPredicted RBP10.96□□□□□ -0.66
SF3B2-201ENST00000322535 MMRN2Q9H8L6 949 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 DBR1Q9UK59 544 aaKnown RBP10.96□□□□□ -0.66
SF3B2-201ENST00000322535 LAMB1P07942 1786 aa10.96□□□□□ -0.66
SF3B2-201ENST00000322535 A0A1W2PRG0 241 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 FOXO6A8MYZ6 492 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 YBX3P16989 372 aaKnown RBP eCLIP10.95□□□□□ -0.666e-11■□□□□ 9.7
SF3B2-201ENST00000322535 EPS15P42566 896 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 RTP1P59025 263 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 MTMR3Q13615 1198 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 SNX30Q5VWJ9 437 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 KLC3Q6P597 504 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 LRRC8BQ6P9F7 803 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 RRAGAQ7L523 313 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 ADAT2Q7Z6V5 191 aaKnown RBP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 SPATA24Q86W54 205 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 SIAH1Q8IUQ4 282 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 TUBGCP2Q9BSJ2 902 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 PLVAPQ9BX97 442 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 IDI2Q9BXS1 227 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 GLT8D2Q9H1C3 349 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 RPAP3Q9H6T3 665 aaPredicted RBP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 GPBP1L1Q9HC44 474 aaPredicted RBP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 KCNK9Q9NPC2 374 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 KIAA1257Q9ULG3 409 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 LRCH1Q9Y2L9 728 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 PRPF3O43395 683 aaKnown RBP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 TTLL1O95922 423 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 EMP3P54852 163 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 KIF22Q14807 665 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 ABCB5Q2M3G0 1257 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 CCDC153Q494R4 210 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 GALNTL6Q49A17 601 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 RFX8Q6ZV50 586 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 TMC3Q7Z5M5 1100 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 RIBC1Q8N443 379 aaPredicted RBP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 STKLD1Q8NE28 680 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 PLIN2Q99541 437 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 CCPG1Q9ULG6 757 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 SRPRBQ9Y5M8 271 aaKnown RBP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 CCDC160A6NGH7 325 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 CALM1P0DP23 149 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 CALM2P0DP24 149 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 CALM3P0DP25 149 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 UBL4AP11441 157 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 GRM4Q14833 912 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 DAB2IPQ5VWQ8 1189 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 METTL21CQ5VZV1 264 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 INTS8Q75QN2 995 aaKnown RBP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 ASRGL1Q7L266 308 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 GRAMD2AQ8IUY3 354 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 FAM20CQ8IXL6 584 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 TRPM4Q8TD43 1214 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 ARHGEF2Q92974 986 aaKnown RBP10.95□□□□□ -0.66
SF3B2-201ENST00000322535 ZNF333Q96JL9 665 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 HEPHQ9BQS7 1158 aa10.95□□□□□ -0.66
SF3B2-201ENST00000322535 ECM29Q5VYK3 1845 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 MYH6P13533 1939 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 CNTNAP1P78357 1384 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 KANSL1LA0AUZ9 987 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 TBKBP1A7MCY6 615 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 USP17L10C9JJH3 530 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 WDR46O15213 610 aaKnown RBP10.94□□□□□ -0.66
SF3B2-201ENST00000322535 NKRFO15226 690 aaKnown RBP eCLIP10.94□□□□□ -0.66
SF3B2-201ENST00000322535 TTI1O43156 1089 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 VAV1P15498 845 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 TKTP29401 623 aaKnown RBP10.94□□□□□ -0.66
SF3B2-201ENST00000322535 DNM2P50570 870 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 ZNF132P52740 706 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 NPY5RQ15761 445 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 LIN52Q52LA3 116 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 KIAA1755Q5JYT7 1200 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 KAZNQ674X7 775 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 VASH1Q7L8A9 365 aaPredicted RBP10.94□□□□□ -0.66
SF3B2-201ENST00000322535 TTC39CQ8N584 583 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 GATA6Q92908 595 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 TUBGCP5Q96RT8 1024 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 ADAM7Q9H2U9 754 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms