RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 GALNT17Q6IS24 598 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 POTEHQ6S545 545 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 RSPO2Q6UXX9 243 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-201ENST00000242776 ZNF852Q6ZMS4 543 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 PRR23BQ6ZRT6 265 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 IFNLR1Q8IU57 520 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-201ENST00000242776 CCDC83Q8IWF9 413 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 GPR65Q8IYL9 337 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 GPR161Q8N6U8 529 aaKnown RBP15.23■□□□□ 0.03
DDX39A-201ENST00000242776 CHAMP1Q96JM3 812 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 OSBPL6Q9BZF3 934 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 DAXXQ9UER7 740 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-201ENST00000242776 CDY1Q9Y6F8 540 aa15.23■□□□□ 0.03
DDX39A-201ENST00000242776 PRR5-ARHGAP8B1AHC4 643 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 NCAM2O15394 837 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 LILRB5O75023 590 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 RECQL4O94761 1208 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 HSP90AA1P07900 732 aaKnown RBP15.22■□□□□ 0.03
DDX39A-201ENST00000242776 RHOP08100 348 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 ARPP19P56211 112 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 ARHGAP8P85298 464 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 ST3GAL2Q16842 350 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 NECAB1Q8N987 351 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 CLDN23Q96B33 292 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 RAB23Q9ULC3 237 aa15.22■□□□□ 0.03
DDX39A-201ENST00000242776 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-201ENST00000242776 NRG2O14511 850 aaPredicted RBP15.21■□□□□ 0.03
DDX39A-201ENST00000242776 TBX3O15119 743 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 DGAT1O75907 488 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 TGM1P22735 817 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 TKTP29401 623 aaKnown RBP15.21■□□□□ 0.03
DDX39A-201ENST00000242776 HOXA9P31269 272 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 MAGEA9P43362 315 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 RAB33AQ14088 237 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 SLFN12Q8IYM2 578 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 LLPHQ9BRT6 129 aaKnown RBP15.21■□□□□ 0.03
DDX39A-201ENST00000242776 RTKNQ9BST9 563 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 PDZD7Q9H5P4 517 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
DDX39A-201ENST00000242776 PDCD11Q14690 1871 aaKnown RBP15.21■□□□□ 0.02
DDX39A-201ENST00000242776 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 BRCC3P46736 316 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 RARRES1P49788 294 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 FOSBP53539 338 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 POU5F1BQ06416 359 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 ADCY1Q08828 1119 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 FZD5Q13467 585 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 CUL4AQ13619 759 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 PPM1JQ5JR12 505 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 TCEAL4Q96EI5 215 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 NELL2Q99435 816 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 CORO1BQ9BR76 489 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 BRD9Q9H8M2 597 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 PRMT8Q9NR22 394 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 ANKEF1Q9NU02 776 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 MRPS17Q9Y2R5 130 aaKnown RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 SHISA7A6NL88 538 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 TBC1D4O60343 1298 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 ECI2O75521 394 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 B3GAT3O94766 335 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 LRG1P02750 347 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 TXKP42681 527 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 CLCNKBP51801 687 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 HMGN5P82970 282 aaKnown RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 ELAVL2Q12926 359 aaKnown RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 SRSF5Q13243 272 aaKnown RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 NR5A1Q13285 461 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 PRPF4BQ13523 1007 aaKnown RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 NAB2Q15742 525 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 EEF1DP3Q658K8 133 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 ZBTB8OSQ8IWT0 167 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 NELL1Q92832 810 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 POLD4Q9HCU8 107 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 PRMT7Q9NVM4 692 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-201ENST00000242776 MTRRQ9UBK8 725 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 KCNH3Q9ULD8 1083 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 PCDHA12Q9UN75 941 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 KIF3AQ9Y496 699 aa15.2■□□□□ 0.02
DDX39A-201ENST00000242776 STK36Q9NRP7 1315 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 PRRG1O14668 218 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 N4BP3O15049 544 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 EDN1P05305 212 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 ATP2B1P20020 1258 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 FGFR3P22607 806 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 RPS9P46781 194 aaKnown RBP15.19■□□□□ 0.02
DDX39A-201ENST00000242776 CALCRLQ16602 461 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 UVSSAQ2YD98 709 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 PDXDC1Q6P996 788 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 BSNDQ8WZ55 320 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
DDX39A-201ENST00000242776 NAP1L4Q99733 375 aaKnown RBP15.19■□□□□ 0.02
DDX39A-201ENST00000242776 HSD17B14Q9BPX1 270 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 NFKBIZQ9BYH8 718 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 TTC12Q9H892 705 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-201ENST00000242776 LMAN1LQ9HAT1 526 aa15.19■□□□□ 0.02
DDX39A-201ENST00000242776 F5P12259 2224 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 PRKCBP05771 671 aa15.18■□□□□ 0.02
DDX39A-201ENST00000242776 ADRB1P08588 477 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms