RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PI4K2AQ9BTU6 479 aa19.55■□□□□ 0.72
VIM-201ENST00000224237 DUSP10Q9Y6W6 482 aa19.55■□□□□ 0.72
VIM-201ENST00000224237 A0A1B0GUA9 196 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 MACROD2A1Z1Q3 448 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 B4GALT4O60513 344 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 PHACTR2O75167 634 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 MYCNP04198 464 aaPredicted RBP19.54■□□□□ 0.72
VIM-201ENST00000224237 CLTAP09496 248 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 OSTNP61366 133 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 NCBP1Q09161 790 aaKnown RBP19.54■□□□□ 0.72
VIM-201ENST00000224237 DUOXA2Q1HG44 320 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 CXCL17Q6UXB2 119 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 ZNF296Q8WUU4 475 aaPredicted RBP19.54■□□□□ 0.72
VIM-201ENST00000224237 DNAJB3Q8WWF6 145 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 TATDN2Q93075 761 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 IMPG2Q9BZV3 1241 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 TSKSQ9UJT2 592 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 NENFQ9UMX5 172 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 GINS2Q9Y248 185 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 SCN10AQ9Y5Y9 1956 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 ADAMTS4O75173 837 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 GNRH1P01148 92 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 ANK1P16157 1881 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 NCOA4Q13772 614 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 NME8Q8N427 588 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 TRIM58Q8NG06 486 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 OSMRQ99650 979 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 NAPGQ99747 312 aaPredicted RBP19.54■□□□□ 0.72
VIM-201ENST00000224237 MTMR12Q9C0I1 747 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 XPNPEP3Q9NQH7 507 aa19.54■□□□□ 0.72
VIM-201ENST00000224237 DDX3XO00571 662 aaKnown RBP eCLIP19.53■□□□□ 0.728e-32■■■□□ 14.7
VIM-201ENST00000224237 HMGCRP04035 888 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 TMEM191BP0C7N4 346 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 STAG3L1P0CL83 205 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 CXCL8P10145 99 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 DARSP14868 501 aaKnown RBP19.53■□□□□ 0.72
VIM-201ENST00000224237 USP8P40818 1118 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 TAF2Q6P1X5 1199 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 APBB1IPQ7Z5R6 666 aaPredicted RBP19.53■□□□□ 0.72
VIM-201ENST00000224237 SLC30A5Q8TAD4 765 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 LNX1Q8TBB1 728 aaPredicted RBP19.53■□□□□ 0.72
VIM-201ENST00000224237 RAET1EQ8TD07 263 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 ANKRD36BP1Q96IX9 119 aa19.53■□□□□ 0.72
VIM-201ENST00000224237 FGFR4P22455 802 aa19.52■□□□□ 0.72
VIM-201ENST00000224237 NOP14P78316 857 aaKnown RBP19.52■□□□□ 0.72
VIM-201ENST00000224237 DCAF4L1Q3SXM0 396 aa19.52■□□□□ 0.72
VIM-201ENST00000224237 CATSPER4Q7RTX7 472 aa19.52■□□□□ 0.72
VIM-201ENST00000224237 TRAPPC11Q7Z392 1133 aa19.52■□□□□ 0.72
VIM-201ENST00000224237 RNF10Q8N5U6 811 aaKnown RBP19.52■□□□□ 0.72
VIM-201ENST00000224237 OLIG1Q8TAK6 271 aa19.52■□□□□ 0.72
VIM-201ENST00000224237 CDHR5Q9HBB8 845 aa19.52■□□□□ 0.72
VIM-201ENST00000224237 GTF2IRD1Q9UHL9 959 aa19.52■□□□□ 0.72
VIM-201ENST00000224237 TACC1O75410 805 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 TNNC2P02585 160 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 TNFAIP3P21580 790 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 EIF4BP23588 611 aaKnown RBP19.52■□□□□ 0.71
VIM-201ENST00000224237 TBXAS1P24557 533 aaPredicted RBP19.52■□□□□ 0.71
VIM-201ENST00000224237 TFAMQ00059 246 aaKnown RBP19.52■□□□□ 0.71
VIM-201ENST00000224237 GLYCTKQ8IVS8 523 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 TMEM192Q8IY95 271 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 EPS8L1Q8TE68 723 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 ELMO3Q96BJ8 720 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 ALS2CR12Q96Q35 445 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 AGPAT1Q99943 283 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 INTUQ9ULD6 942 aa19.52■□□□□ 0.71
VIM-201ENST00000224237 BTNL10A8MVZ5 291 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 FKTNO75072 461 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 MAP3K21Q5TCX8 1036 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 NOTUMQ6P988 496 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 EFCAB13Q8IY85 973 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 U2AF1L4Q8WU68 220 aaKnown RBP19.51■□□□□ 0.71
VIM-201ENST00000224237 NOX5Q96PH1 765 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 PACSIN1Q9BY11 444 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 ASB7Q9H672 318 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 MRFAP1Q9Y605 127 aa19.51■□□□□ 0.71
VIM-201ENST00000224237 CYP26A1O43174 497 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 SLU7O95391 586 aaKnown RBP19.5■□□□□ 0.71
VIM-201ENST00000224237 ASS1P00966 412 aaKnown RBP19.5■□□□□ 0.71
VIM-201ENST00000224237 CST5P28325 142 aaPredicted RBP19.5■□□□□ 0.71
VIM-201ENST00000224237 AXLP30530 894 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 PDE6CP51160 858 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 CUL2Q13617 745 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 TUBB2AQ13885 445 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 NBPF20Q3BBV1 942 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 SPOPLQ6IQ16 392 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 KLHDC9Q8NEP7 349 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 PXYLP1Q8TE99 480 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 ERO1AQ96HE7 468 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 TUBB2BQ9BVA1 445 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 CAPN6Q9Y6Q1 641 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 CEP350Q5VT06 3117 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 ANO9A1A5B4 782 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 CLSTN1O94985 981 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 H2AFZP0C0S5 128 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 HOXA11P31270 313 aaPredicted RBP19.5■□□□□ 0.71
VIM-201ENST00000224237 TRPC3Q13507 836 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 SNX17Q15036 470 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 SLC27A1Q6PCB7 646 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 H2AFVQ71UI9 128 aa19.5■□□□□ 0.71
VIM-201ENST00000224237 APOBEC3GQ9HC16 384 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms