RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C PEP8P40335 379 aa1.96□□□□□ -2.1
RPF2YKR081C KAP114P53067 1004 aa1.96□□□□□ -2.1
RPF2YKR081C CTF19Q02732 369 aa1.96□□□□□ -2.1
RPF2YKR081C BBP1Q12365 385 aa1.96□□□□□ -2.1
RPF2YKR081C SNF8Q12483 233 aa1.96□□□□□ -2.1
RPF2YKR081C YPL119C-AQ3E751 87 aa1.96□□□□□ -2.1
RPF2YKR081C GRX3Q03835 250 aa1.95□□□□□ -2.1
RPF2YKR081C Q0255P03881 472 aa1.94□□□□□ -2.1
RPF2YKR081C FBA1P14540 359 aaKnown RBP1.94□□□□□ -2.1
RPF2YKR081C DOG1P38774 246 aa1.94□□□□□ -2.1
RPF2YKR081C SMD3P43321 101 aaKnown RBP1.94□□□□□ -2.1
RPF2YKR081C YGL034CP53186 121 aa1.94□□□□□ -2.1
RPF2YKR081C ERV25P54837 211 aaKnown RBP1.94□□□□□ -2.1
RPF2YKR081C YDR124WQ04608 324 aa1.94□□□□□ -2.1
RPF2YKR081C YHR032W-AP0C5N6 59 aa1.93□□□□□ -2.1
RPF2YKR081C PEX4P29340 183 aa1.93□□□□□ -2.1
RPF2YKR081C YER189WP40104 122 aa1.93□□□□□ -2.1
RPF2YKR081C YMR279CQ03263 540 aa1.93□□□□□ -2.1
RPF2YKR081C TLG1Q03322 224 aa1.93□□□□□ -2.1
RPF2YKR081C OST6Q03723 332 aa1.93□□□□□ -2.1
RPF2YKR081C RAS2P01120 322 aaKnown RBP1.92□□□□□ -2.1
RPF2YKR081C SCL1P21243 252 aaKnown RBP1.92□□□□□ -2.1
RPF2YKR081C VPS3P23643 1011 aa1.92□□□□□ -2.1
RPF2YKR081C MRH4P53166 561 aa1.92□□□□□ -2.1
RPF2YKR081C YGR026WP53217 278 aa1.92□□□□□ -2.1
RPF2YKR081C YLR179CQ06252 201 aaKnown RBP1.92□□□□□ -2.1
RPF2YKR081C ATG17Q06410 417 aa1.92□□□□□ -2.1
RPF2YKR081C AKR2Q12013 749 aa1.92□□□□□ -2.1
RPF2YKR081C YLR462WO13556 202 aa1.91□□□□□ -2.1
RPF2YKR081C CDC7P06243 507 aa1.91□□□□□ -2.1
RPF2YKR081C QRI5P32344 111 aa1.91□□□□□ -2.1
RPF2YKR081C RRF1P38771 230 aa1.91□□□□□ -2.1
RPF2YKR081C YHR125WP38831 101 aa1.91□□□□□ -2.1
RPF2YKR081C YEL075CP39972 122 aa1.91□□□□□ -2.1
RPF2YKR081C GOT1Q03554 138 aa1.91□□□□□ -2.1
RPF2YKR081C YPR147CQ06522 304 aaKnown RBP1.91□□□□□ -2.1
RPF2YKR081C QCR6P00127 147 aa1.9□□□□□ -2.11
RPF2YKR081C MRPS8Q03799 155 aa1.9□□□□□ -2.11
RPF2YKR081C SYC1Q08553 188 aaPredicted RBP1.9□□□□□ -2.11
RPF2YKR081C SWI1P09547 1314 aa1.9□□□□□ -2.11
RPF2YKR081C COX2P00410 251 aa1.89□□□□□ -2.11
RPF2YKR081C RPL24AP04449 155 aaKnown RBP1.89□□□□□ -2.11
RPF2YKR081C PRS2P38620 318 aaKnown RBP1.89□□□□□ -2.11
RPF2YKR081C EMC2P47133 292 aaKnown RBP1.89□□□□□ -2.11
RPF2YKR081C ALG11P53954 548 aaKnown RBP1.89□□□□□ -2.11
RPF2YKR081C FAR8Q05040 523 aa1.89□□□□□ -2.11
RPF2YKR081C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
RPF2YKR081C ATO3Q12359 275 aa1.89□□□□□ -2.11
RPF2YKR081C COX5AP00424 153 aa1.88□□□□□ -2.11
RPF2YKR081C DSF1P0CX08 502 aa1.88□□□□□ -2.11
RPF2YKR081C YNR073CP0CX09 502 aa1.88□□□□□ -2.11
RPF2YKR081C MDH3P32419 343 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
RPF2YKR081C PET100P38958 111 aa1.88□□□□□ -2.11
RPF2YKR081C YER135CP40082 130 aa1.88□□□□□ -2.11
RPF2YKR081C YKR104WP0CE69 306 aa1.87□□□□□ -2.11
RPF2YKR081C MRP1P10662 321 aaKnown RBP1.87□□□□□ -2.11
RPF2YKR081C FZO1P38297 855 aa1.87□□□□□ -2.11
RPF2YKR081C CTR2P38865 189 aa1.87□□□□□ -2.11
RPF2YKR081C THO1P40040 218 aaKnown RBP1.87□□□□□ -2.11
RPF2YKR081C JEN1P36035 616 aa1.86□□□□□ -2.11
RPF2YKR081C MSA2P36157 363 aa1.86□□□□□ -2.11
RPF2YKR081C PHO88P38264 188 aaPredicted RBP1.86□□□□□ -2.11
RPF2YKR081C VTC1P40046 129 aaRIP-Chip data1.86□□□□□ -2.11not detected
RPF2YKR081C BMT5P40493 336 aa1.86□□□□□ -2.11
RPF2YKR081C SNZ3P43545 298 aa1.86□□□□□ -2.11
RPF2YKR081C ERG25P53045 309 aa1.86□□□□□ -2.11
RPF2YKR081C ADH6Q04894 360 aaKnown RBP1.86□□□□□ -2.11
RPF2YKR081C COQ10Q08058 207 aa1.86□□□□□ -2.11
RPF2YKR081C RRP40Q08285 240 aaKnown RBP1.86□□□□□ -2.11
RPF2YKR081C CYR1P08678 2026 aaKnown RBP1.85□□□□□ -2.11
RPF2YKR081C YOL162WP0CF19 215 aa1.85□□□□□ -2.11
RPF2YKR081C MDH2P22133 377 aa1.85□□□□□ -2.11
RPF2YKR081C RAD51P25454 400 aa1.85□□□□□ -2.11
RPF2YKR081C EHD3P28817 500 aa1.85□□□□□ -2.11
RPF2YKR081C ERG24P32462 438 aaKnown RBP1.85□□□□□ -2.11
RPF2YKR081C YAR1P46683 200 aa1.85□□□□□ -2.11
RPF2YKR081C CIS3P47001 227 aa1.85□□□□□ -2.11
RPF2YKR081C YGR219WP53307 113 aa1.85□□□□□ -2.11
RPF2YKR081C COX20Q04935 205 aa1.85□□□□□ -2.11
RPF2YKR081C YLR030WQ07967 263 aa1.85□□□□□ -2.11
RPF2YKR081C DAL82P21705 255 aa1.84□□□□□ -2.11
RPF2YKR081C MRPL39P36533 70 aa1.84□□□□□ -2.11
RPF2YKR081C SMB1P40018 196 aaKnown RBP1.84□□□□□ -2.11
RPF2YKR081C YGL159WP53110 370 aa1.84□□□□□ -2.11
RPF2YKR081C CYT2Q00873 224 aa1.84□□□□□ -2.11
RPF2YKR081C DCN1Q12395 269 aa1.84□□□□□ -2.11
RPF2YKR081C RPL9AP05738 191 aaKnown RBP1.83□□□□□ -2.12
RPF2YKR081C VMA11P32842 164 aa1.83□□□□□ -2.12
RPF2YKR081C YHR022CP38763 256 aa1.83□□□□□ -2.12
RPF2YKR081C DSE2P38844 325 aa1.83□□□□□ -2.12
RPF2YKR081C RPL9BP51401 191 aaKnown RBP1.83□□□□□ -2.12
RPF2YKR081C GTR2P53290 341 aa1.83□□□□□ -2.12
RPF2YKR081C SPG4Q04438 115 aa1.83□□□□□ -2.12
RPF2YKR081C INM2Q05533 292 aa1.83□□□□□ -2.12
RPF2YKR081C YPR098CQ06089 161 aa1.83□□□□□ -2.12
RPF2YKR081C MON2P48563 1636 aaPredicted RBP1.82□□□□□ -2.12
RPF2YKR081C HOM6P31116 359 aaKnown RBP1.82□□□□□ -2.12
RPF2YKR081C OAC1P32332 324 aa1.82□□□□□ -2.12
RPF2YKR081C MRPL37P36532 105 aa1.82□□□□□ -2.12
RPF2YKR081C PRM10P42946 383 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 374.4 ms