RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	YDR124W	Q04608	324 aa		3.52	□□□□□ -1.85
SPI1	YER150W	RFM1	Q12192	310 aa		3.52	□□□□□ -1.85
SPI1	YER150W	TRM10	Q12400	293 aa		3.52	□□□□□ -1.85
SPI1	YER150W	COX5A	P00424	153 aa		3.51	□□□□□ -1.85
SPI1	YER150W	ALG7	P07286	448 aa		3.51	□□□□□ -1.85
SPI1	YER150W	DDI2	P0CH63	225 aa		3.51	□□□□□ -1.85
SPI1	YER150W	DDI3	P0CH64	225 aa		3.51	□□□□□ -1.85
SPI1	YER150W	NUP1	P20676	1076 aa		3.51	□□□□□ -1.85
SPI1	YER150W	HCM1	P25364	564 aa		3.51	□□□□□ -1.85
SPI1	YER150W	RSA4	P25382	515 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	KAR4	P25583	335 aa		3.51	□□□□□ -1.85
SPI1	YER150W	PEX34	P25584	144 aa		3.51	□□□□□ -1.85
SPI1	YER150W	MRP49	P32388	137 aa		3.51	□□□□□ -1.85
SPI1	YER150W	HYM1	P32464	399 aa		3.51	□□□□□ -1.85
SPI1	YER150W	PDC2	P32896	925 aa		3.51	□□□□□ -1.85
SPI1	YER150W	LHP1	P33399	275 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	SRY1	P36007	326 aa		3.51	□□□□□ -1.85
SPI1	YER150W	PAN3	P36102	679 aa	Predicted RBP	3.51	□□□□□ -1.85
SPI1	YER150W	ATG12	P38316	186 aa		3.51	□□□□□ -1.85
SPI1	YER150W	YGP1	P38616	354 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	COS8	P38723	381 aa		3.51	□□□□□ -1.85
SPI1	YER150W	SIM1	P40472	476 aa		3.51	□□□□□ -1.85
SPI1	YER150W	YIL067C	P40514	678 aa		3.51	□□□□□ -1.85
SPI1	YER150W	YIL029C	P40538	142 aa		3.51	□□□□□ -1.85
SPI1	YER150W	HAC1	P41546	238 aa		3.51	□□□□□ -1.85
SPI1	YER150W	SER2	P42941	309 aa		3.51	□□□□□ -1.85
SPI1	YER150W	YFL064C	P43540	174 aa		3.51	□□□□□ -1.85
SPI1	YER150W	WWM1	P43582	211 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	YJR015W	P47090	510 aa		3.51	□□□□□ -1.85
SPI1	YER150W	COQ5	P49017	307 aa		3.51	□□□□□ -1.85
SPI1	YER150W	YIP1	P53039	248 aa		3.51	□□□□□ -1.85
SPI1	YER150W	VHT1	P53241	593 aa		3.51	□□□□□ -1.85
SPI1	YER150W	SWS2	P53937	143 aa		3.51	□□□□□ -1.85
SPI1	YER150W	ACT1	P60010	375 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	ELP3	Q02908	557 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	YPL113C	Q02961	396 aa		3.51	□□□□□ -1.85
SPI1	YER150W	RSC9	Q03124	581 aa		3.51	□□□□□ -1.85
SPI1	YER150W	GPI17	Q04080	534 aa		3.51	□□□□□ -1.85
SPI1	YER150W	YET2	Q04210	160 aa		3.51	□□□□□ -1.85
SPI1	YER150W	YMR320W	Q04897	101 aa		3.51	□□□□□ -1.85
SPI1	YER150W	TAF9	Q05027	157 aa		3.51	□□□□□ -1.85
SPI1	YER150W	CNL1	Q06333	122 aa		3.51	□□□□□ -1.85
SPI1	YER150W	TAZ1	Q06510	381 aa		3.51	□□□□□ -1.85
SPI1	YER150W	COQ10	Q08058	207 aa		3.51	□□□□□ -1.85
SPI1	YER150W	HRD1	Q08109	551 aa		3.51	□□□□□ -1.85
SPI1	YER150W	YOL073C	Q08232	322 aa		3.51	□□□□□ -1.85
SPI1	YER150W	RDL2	Q08742	149 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	YPR202W	Q08993	238 aa		3.51	□□□□□ -1.85
SPI1	YER150W	USV1	Q12132	391 aa		3.51	□□□□□ -1.85
SPI1	YER150W	HRT3	Q12347	344 aa		3.51	□□□□□ -1.85
SPI1	YER150W	AHA1	Q12449	350 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	HTZ1	Q12692	134 aa	Known RBP	3.51	□□□□□ -1.85
SPI1	YER150W	REP1	P03871	373 aa		3.5	□□□□□ -1.85
SPI1	YER150W	PHO13	P19881	312 aa		3.5	□□□□□ -1.85
SPI1	YER150W	CDC50	P25656	391 aa		3.5	□□□□□ -1.85
SPI1	YER150W	AEP1	P32493	518 aa		3.5	□□□□□ -1.85
SPI1	YER150W	HIS7	P33734	552 aa	Known RBP	3.5	□□□□□ -1.85
SPI1	YER150W	TIR2	P33890	251 aa		3.5	□□□□□ -1.85
SPI1	YER150W	KTI12	P34253	313 aa	Known RBP	3.5	□□□□□ -1.85
SPI1	YER150W	GPX2	P38143	162 aa		3.5	□□□□□ -1.85
SPI1	YER150W	DOG2	P38773	246 aa		3.5	□□□□□ -1.85
SPI1	YER150W	DOG1	P38774	246 aa		3.5	□□□□□ -1.85
SPI1	YER150W	YIL169C	P40442	995 aa		3.5	□□□□□ -1.85
SPI1	YER150W	DFG10	P40526	253 aa		3.5	□□□□□ -1.85
SPI1	YER150W	EGT2	P42835	1041 aa		3.5	□□□□□ -1.85
SPI1	YER150W	IKS1	P47042	667 aa		3.5	□□□□□ -1.85
SPI1	YER150W	TPN1	P53099	579 aa		3.5	□□□□□ -1.85
SPI1	YER150W	TOS8	P53147	276 aa		3.5	□□□□□ -1.85
SPI1	YER150W	PRM8	P53174	237 aa		3.5	□□□□□ -1.85
SPI1	YER150W	FRE4	P53746	719 aa		3.5	□□□□□ -1.85
SPI1	YER150W	YNL184C	P53876	108 aa		3.5	□□□□□ -1.85
SPI1	YER150W	RHO4	Q00246	291 aa		3.5	□□□□□ -1.85
SPI1	YER150W	YPL014W	Q02606	381 aa		3.5	□□□□□ -1.85
SPI1	YER150W	YMR206W	Q03695	313 aa		3.5	□□□□□ -1.85
SPI1	YER150W	FMN1	Q03778	218 aa		3.5	□□□□□ -1.85
SPI1	YER150W	TSA2	Q04120	196 aa		3.5	□□□□□ -1.85
SPI1	YER150W	HPT1	Q04178	221 aa	Known RBP	3.5	□□□□□ -1.85
SPI1	YER150W	YMR317W	Q04893	1140 aa		3.5	□□□□□ -1.85
SPI1	YER150W	IRC10	Q08118	586 aa		3.5	□□□□□ -1.85
SPI1	YER150W	GEP5	Q12393	293 aa		3.5	□□□□□ -1.85
SPI1	YER150W	TSC11	P40061	1430 aa		3.5	□□□□□ -1.85
SPI1	YER150W	TRM732	Q03496	1420 aa		3.5	□□□□□ -1.85
SPI1	YER150W	YER145C-A	A0A023PYF4	145 aa		3.49	□□□□□ -1.85
SPI1	YER150W	YCR006C	P25350	157 aa		3.49	□□□□□ -1.85
SPI1	YER150W	AHC2	P25649	128 aa		3.49	□□□□□ -1.85
SPI1	YER150W	RPC19	P28000	142 aa	Known RBP	3.49	□□□□□ -1.85
SPI1	YER150W	SNC1	P31109	117 aa		3.49	□□□□□ -1.85
SPI1	YER150W	PHA2	P32452	334 aa		3.49	□□□□□ -1.85
SPI1	YER150W	SFC1	P33303	322 aa		3.49	□□□□□ -1.85
SPI1	YER150W	SFK1	P35735	353 aa		3.49	□□□□□ -1.85
SPI1	YER150W	YNK1	P36010	153 aa	Known RBP	3.49	□□□□□ -1.85
SPI1	YER150W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
SPI1	YER150W	YCR041W	P37265	110 aa		3.49	□□□□□ -1.85
SPI1	YER150W	YBR220C	P38318	560 aa		3.49	□□□□□ -1.85
SPI1	YER150W	RPS20	P38701	121 aa	Known RBP	3.49	□□□□□ -1.85
SPI1	YER150W	LEU5	P38702	357 aa		3.49	□□□□□ -1.85
SPI1	YER150W	PCL5	P38794	229 aa		3.49	□□□□□ -1.85
SPI1	YER150W	TRR2	P38816	342 aa		3.49	□□□□□ -1.85
SPI1	YER150W	SPL2	P38839	148 aa		3.49	□□□□□ -1.85
SPI1	YER150W	PEX22	P39718	180 aa		3.49	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms