RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR2	YDR299W	YLR462W	O13556	202 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	RPL9A	P05738	191 aa	Known RBP	0.6	□□□□□ -2.31
BFR2	YDR299W	RAD10	P06838	210 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	SGA1	P08019	549 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	COS2	P0CX12	379 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	COS3	P0CX13	379 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	FBA1	P14540	359 aa	Known RBP	0.6	□□□□□ -2.31
BFR2	YDR299W	POF1	P25576	258 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	MRX3	P38172	270 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	YEL075C	P39972	122 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	VTC1	P40046	129 aa	RIP-Chip data	0.6	□□□□□ -2.31	not detected
BFR2	YDR299W	RTT105	P40063	208 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	YER188W	P40103	239 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	COA1	P40452	197 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	SER33	P40510	469 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	SNX4	P47057	423 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	YJR056C	P47115	236 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	BAT2	P47176	376 aa	Known RBP	0.6	□□□□□ -2.31
BFR2	YDR299W	RPL9B	P51401	191 aa	Known RBP	0.6	□□□□□ -2.31
BFR2	YDR299W	ERG25	P53045	309 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	SLM2	P53955	656 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	YPR098C	Q06089	161 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	CTS2	Q06350	511 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
BFR2	YDR299W	YOL019W	Q08157	551 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	USB1	Q12208	290 aa	Known RBP	0.6	□□□□□ -2.31
BFR2	YDR299W	GEP5	Q12393	293 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	YBL112C	Q3E7Y4	105 aa		0.6	□□□□□ -2.31
BFR2	YDR299W	COX2	P00410	251 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	Q0255	P03881	472 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	YKR104W	P0CE69	306 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	OM45	P16547	393 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	SEC22	P22214	214 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.32	not detected
BFR2	YDR299W	RCN1	P36054	211 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	PRS4	P38063	326 aa	Predicted RBP	0.59	□□□□□ -2.32
BFR2	YDR299W	PEP8	P40335	379 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	FIS1	P40515	155 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	GON7	P46984	123 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	PIR5	P46999	287 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	YJR079W	P47126	109 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	YGL185C	P53100	379 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	USE1	P53146	245 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	DID2	P69771	204 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	ABF2	Q02486	183 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	MZM1	Q03429	123 aa	Predicted RBP	0.59	□□□□□ -2.32
BFR2	YDR299W	SPG4	Q04438	115 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	AKR2	Q12013	749 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	YPL119C-A	Q3E751	87 aa		0.59	□□□□□ -2.32
BFR2	YDR299W	LSO2	Q3E772	92 aa	Known RBP	0.59	□□□□□ -2.32
BFR2	YDR299W	RPP0	P05317	312 aa	Known RBP	0.58	□□□□□ -2.32
BFR2	YDR299W	RSR1	P13856	272 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	MDH2	P22133	377 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	PEX4	P29340	183 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	HOM6	P31116	359 aa	Known RBP	0.58	□□□□□ -2.32
BFR2	YDR299W	SGE1	P33335	543 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	MRPL37	P36532	105 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	MED6	P38782	295 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	SVP26	P38869	228 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	MEP1	P40260	492 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	AYR1	P40471	297 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	YJR146W	P47174	117 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	MDM34	P53083	459 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	GTR2	P53290	341 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	YGR219W	P53307	113 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	OST6	Q03723	332 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	EMI1	Q04406	187 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	INM2	Q05533	292 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	DCR2	Q05924	578 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	SSQ1	Q05931	657 aa	Predicted RBP	0.58	□□□□□ -2.32
BFR2	YDR299W	LOA1	Q06508	300 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	ARV1	Q06541	321 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	RDS3	Q06835	107 aa	Predicted RBP	0.58	□□□□□ -2.32
BFR2	YDR299W	RRS1	Q08746	203 aa	Known RBP	0.58	□□□□□ -2.32
BFR2	YDR299W	YPL257W	Q08974	193 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	BTS1	Q12051	335 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	YCT1	Q12235	531 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	TPO4	Q12256	659 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	YOR020W-A	Q3E824	90 aa		0.58	□□□□□ -2.32
BFR2	YDR299W	IPP1	P00817	287 aa	Known RBP	0.57	□□□□□ -2.32
BFR2	YDR299W	MSW1	P04803	379 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	MSF1	P08425	469 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	DSF1	P0CX08	502 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	YNR073C	P0CX09	502 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	SNA3	P14359	133 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	YCR102C	P25608	368 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	QRI5	P32344	111 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	ERG24	P32462	438 aa	Known RBP	0.57	□□□□□ -2.32
BFR2	YDR299W	CUE1	P38428	203 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	YHR125W	P38831	101 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.57	□□□□□ -2.32	RIP-Chip
BFR2	YDR299W	YAR068W	P39564	161 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	YMR144W	P40214	342 aa	Known RBP	0.57	□□□□□ -2.32
BFR2	YDR299W	FMC1	P40491	155 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	YKE4	P40544	346 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	YIL001W	P40560	513 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	DAN1	P47178	298 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	NUP84	P52891	726 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	CAB4	P53332	305 aa		0.57	□□□□□ -2.32
BFR2	YDR299W	BUD25	P85052	153 aa		0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 66 ms