RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 PCDHGA2Q9Y5H1 932 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 FPGT-TNNI3KV9GXZ4 949 aa4.45□□□□□ -1.7
SRP54-214ENST00000630962 A0A087X1B8 175 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 TMEM200CA6NKL6 621 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 SGTAO43765 313 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 B3GALT2O43825 422 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 RPS6KA4O75676 772 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 RAP2AP10114 183 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 OSMP13725 252 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 ZSCAN20P17040 1043 aaPredicted RBP4.44□□□□□ -1.7
SRP54-214ENST00000630962 USP14P54578 494 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 CREMQ03060 361 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 PPP3CAQ08209 521 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 ITKQ08881 620 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 INAVAQ3KP66 663 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 MFSD14BQ5SR56 506 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 SEM1Q6ZVN7 128 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 RHOT2Q8IXI1 618 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 FAM43AQ8N2R8 423 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 C1orf162Q8NEQ5 155 aaPredicted RBP4.44□□□□□ -1.7
SRP54-214ENST00000630962 SLC9A6Q92581 669 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 HDAC10Q969S8 669 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 CEP95Q96GE4 821 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 FAXDC2Q96IV6 333 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 CEP89Q96ST8 783 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 MRI1Q9BV20 369 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 SLC13A1Q9BZW2 595 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 RNPEPQ9H4A4 650 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 CYP4F11Q9HBI6 524 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 AKIP1Q9NQ31 210 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 MAN1C1Q9NR34 630 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 DNM3Q9UQ16 869 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 CHST2Q9Y4C5 530 aa4.44□□□□□ -1.7
SRP54-214ENST00000630962 ATRNL1Q5VV63 1379 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 DRGXA6NNA5 263 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 GPR32O75388 356 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 RNASE9P60153 205 aaKnown RBP4.43□□□□□ -1.7
SRP54-214ENST00000630962 GUCY1B3Q02153 619 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 FAM102AQ5T9C2 384 aaPredicted RBP4.43□□□□□ -1.7
SRP54-214ENST00000630962 AGAP9Q5VTM2 703 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 AFMIDQ63HM1 303 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 ANKS6Q68DC2 871 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 LAIR1Q6GTX8 287 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 FOXR2Q6PJQ5 311 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 ARHGEF19Q8IW93 802 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 LARP4BQ92615 738 aaKnown RBP4.43□□□□□ -1.7
SRP54-214ENST00000630962 CHFRQ96EP1 664 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 FUBP3Q96I24 572 aaKnown RBP eCLIP4.43□□□□□ -1.7
SRP54-214ENST00000630962 COQ10AQ96MF6 247 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 RNF181Q9P0P0 153 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 NOX1Q9Y5S8 564 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 HS3ST4Q9Y661 456 aa4.43□□□□□ -1.7
SRP54-214ENST00000630962 AHRRA9YTQ3 701 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 FOXN1O15353 648 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 MYBL2P10244 700 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 CCND1P24385 295 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 DDX6P26196 483 aaKnown RBP eCLIP4.42□□□□□ -1.7
SRP54-214ENST00000630962 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 RAB39AQ14964 217 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 UBXN2BQ14CS0 331 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 ACAP2Q15057 778 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 BEAN1Q3B7T3 259 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 DACT2Q5SW24 774 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 ABHD17BQ5VST6 288 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 PNMA8AQ86V59 439 aaPredicted RBP4.42□□□□□ -1.7
SRP54-214ENST00000630962 LCORLQ8N3X6 602 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 AOPEPQ8N6M6 819 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 SUPT20HQ8NEM7 779 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 MED15Q96RN5 788 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 TDP1Q9NUW8 608 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 AJAP1Q9UKB5 411 aaPredicted RBP4.42□□□□□ -1.7
SRP54-214ENST00000630962 PACSIN3Q9UKS6 424 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 TRHDEQ9UKU6 1024 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 USP15Q9Y4E8 981 aaPredicted RBP4.42□□□□□ -1.7
SRP54-214ENST00000630962 COL4A3BPQ9Y5P4 624 aa4.42□□□□□ -1.7
SRP54-214ENST00000630962 LEFTY2O00292 366 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 SUV39H1O43463 412 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 XPOTO43592 962 aaKnown RBP4.41□□□□□ -1.7
SRP54-214ENST00000630962 DTNBO60941 627 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 NDUFS2O75306 463 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 NCR1O76036 304 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 FOSP01100 380 aaPredicted RBP4.41□□□□□ -1.7
SRP54-214ENST00000630962 GCP02774 474 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 MTHFD1P11586 935 aaKnown RBP4.41□□□□□ -1.7
SRP54-214ENST00000630962 VCAM1P19320 739 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 DDCP20711 480 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 GCSHP23434 173 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 CHN2P52757 468 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 INHBEP58166 350 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 CTXN1P60606 82 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 RAP2BP61225 183 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 AMPD3Q01432 767 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 EFCAB2Q5VUJ9 269 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 IGFL4Q6B9Z1 124 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 MED25Q71SY5 747 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 LDLRAD3Q86YD5 345 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 FITM2Q8N6M3 262 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 PRPF38AQ8NAV1 312 aaKnown RBP4.41□□□□□ -1.7
SRP54-214ENST00000630962 REPS2Q8NFH8 660 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms