RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ANHXE9PGG2 379 aa20.92■□□□□ 0.94
SMN2-215ENST00000628696 ACKR2O00590 384 aa20.92■□□□□ 0.94
SMN2-215ENST00000628696 CCL16O15467 120 aa20.92■□□□□ 0.94
SMN2-215ENST00000628696 NEFLP07196 543 aa20.92■□□□□ 0.94
SMN2-215ENST00000628696 RPA1P27694 616 aa20.92■□□□□ 0.94
SMN2-215ENST00000628696 ARHGEF3Q9NR81 526 aa20.92■□□□□ 0.94
SMN2-215ENST00000628696 MYH15Q9Y2K3 1946 aa20.92■□□□□ 0.94
SMN2-215ENST00000628696 ADAM12O43184 909 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 C8AP07357 584 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 DCNP07585 359 aaKnown RBP20.91■□□□□ 0.94
SMN2-215ENST00000628696 HNRNPA1P09651 372 aaKnown RBP eCLIP20.91■□□□□ 0.94
SMN2-215ENST00000628696 OR52Z1P0C646 297 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 NAMPTP43490 491 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 ELAVL2Q12926 359 aaKnown RBP20.91■□□□□ 0.94
SMN2-215ENST00000628696 PPP2R5AQ15172 486 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 DCLRE1AQ6PJP8 1040 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 C8orf76Q96K31 380 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 IFT74Q96LB3 600 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 RPP25Q9BUL9 199 aaKnown RBP20.91■□□□□ 0.94
SMN2-215ENST00000628696 KIFC3Q9BVG8 833 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 SIT1Q9Y3P8 196 aa20.91■□□□□ 0.94
SMN2-215ENST00000628696 ZFP37Q9Y6Q3 630 aaPredicted RBP20.91■□□□□ 0.94
SMN2-215ENST00000628696 EDN1P05305 212 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 ST3GAL1Q11201 340 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 NAB2Q15742 525 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 GLRA4Q5JXX5 417 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 PDXDC1Q6P996 788 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 PARM1Q6UWI2 310 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 CCDC113Q9H0I3 377 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 CDH7Q9ULB5 785 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 DMDP11532 3685 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 VPS13AQ96RL7 3174 aa20.9■□□□□ 0.94
SMN2-215ENST00000628696 XYLBO75191 536 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 OR1D2P34982 312 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 CCT6AP40227 531 aaKnown RBP20.89■□□□□ 0.93
SMN2-215ENST00000628696 GPC5P78333 572 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 DCAF4L1Q3SXM0 396 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 AXDND1Q5T1B0 1012 aaPredicted RBP20.89■□□□□ 0.93
SMN2-215ENST00000628696 PHLDB3Q6NSJ2 640 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.89■□□□□ 0.93
SMN2-215ENST00000628696 SLC7A14Q8TBB6 771 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 FGF14Q92915 247 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 SLC2A4RGQ9NR83 387 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 R4GN57 208 aa20.89■□□□□ 0.93
SMN2-215ENST00000628696 B3GAT3O94766 335 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 IGFBP6P24592 240 aaPredicted RBP20.88■□□□□ 0.93
SMN2-215ENST00000628696 GNL2Q13823 731 aaKnown RBP20.88■□□□□ 0.93
SMN2-215ENST00000628696 TTC38Q5R3I4 469 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 NT5DC1Q5TFE4 455 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 ATF7IP2Q5U623 682 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 CCDC83Q8IWF9 413 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 ITFG1Q8TB96 612 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 FGF13Q92913 245 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 FOXQ1Q9C009 403 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 BHMT2Q9H2M3 363 aa20.88■□□□□ 0.93
SMN2-215ENST00000628696 CLCNKBP51801 687 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 EFNA5P52803 228 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 RAB33AQ14088 237 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 ECM1Q16610 540 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 HAUS3Q68CZ6 603 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 SHDQ96IW2 340 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 HCFC1R1Q9NWW0 138 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 KIAA1024Q9UPX6 916 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 CACNA1IQ9P0X4 2223 aa20.87■□□□□ 0.93
SMN2-215ENST00000628696 MIA3Q5JRA6 1907 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 I3L4J1 428 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 K7ERI5 159 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 FGFR3P22607 806 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 HOXA9P31269 272 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 ORC2Q13416 577 aaPredicted RBP20.86■□□□□ 0.93
SMN2-215ENST00000628696 SNW1Q13573 536 aaKnown RBP20.86■□□□□ 0.93
SMN2-215ENST00000628696 UVSSAQ2YD98 709 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 MTSS1LQ765P7 747 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 APBB1IPQ7Z5R6 666 aaPredicted RBP20.86■□□□□ 0.93
SMN2-215ENST00000628696 KIFAP3Q92845 792 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 FOXP1Q9H334 677 aaPredicted RBP20.86■□□□□ 0.93
SMN2-215ENST00000628696 MTRRQ9UBK8 725 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 LRWD1Q9UFC0 647 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 LIMCH1Q9UPQ0 1083 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 CDY1Q9Y6F8 540 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 NOTCH4Q99466 2003 aa20.86■□□□□ 0.93
SMN2-215ENST00000628696 EP300Q09472 2414 aaPredicted RBP20.85■□□□□ 0.93
SMN2-215ENST00000628696 GVINP1Q7Z2Y8 2422 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 CCDC169A6NNP5 214 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 LRRN2O75325 713 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 LMNAP02545 664 aaKnown RBP20.85■□□□□ 0.93
SMN2-215ENST00000628696 MUTP22033 750 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 TKTP29401 623 aaKnown RBP20.85■□□□□ 0.93
SMN2-215ENST00000628696 RBM25P49756 843 aaKnown RBP20.85■□□□□ 0.93
SMN2-215ENST00000628696 OSTNP61366 133 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 FOXK2Q01167 660 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 RSPO2Q6UXX9 243 aaPredicted RBP20.85■□□□□ 0.93
SMN2-215ENST00000628696 C1orf210Q8IVY1 113 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 PJA1Q8NG27 643 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 PPP1R10Q96QC0 940 aaKnown RBP20.85■□□□□ 0.93
SMN2-215ENST00000628696 SEMA4AQ9H3S1 761 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 GOLGA2P5Q9HBQ8 144 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 DLGAP2Q9P1A6 1054 aa20.85■□□□□ 0.93
SMN2-215ENST00000628696 DNMT3BQ9UBC3 853 aaKnown RBP20.85■□□□□ 0.93
SMN2-215ENST00000628696 TMEM189-UBE2V1I3L0A0 370 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms