RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 USP15Q9Y4E8 981 aaPredicted RBP5.94□□□□□ -1.46
HDDC2-207ENST00000608532 ACTL7AQ9Y615 435 aa5.94□□□□□ -1.46
HDDC2-207ENST00000608532 ATRNL1Q5VV63 1379 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 TRIM75PA6NK02 468 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 DRGXA6NNA5 263 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 FAM171A2A8MVW0 826 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 RNASET2O00584 256 aaKnown RBP5.93□□□□□ -1.46
HDDC2-207ENST00000608532 PJA2O43164 708 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 ITGB1P05556 798 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 ZSCAN20P17040 1043 aaPredicted RBP5.93□□□□□ -1.46
HDDC2-207ENST00000608532 ALDH1A3P47895 512 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 MGAT2Q10469 447 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 FSTL1Q12841 308 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 MTMR1Q13613 665 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 PTPAQ15257 358 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 PDCD4Q53EL6 469 aaKnown RBP5.93□□□□□ -1.46
HDDC2-207ENST00000608532 LY6G5CQ5SRR4 150 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 MED25Q71SY5 747 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 RHOT1Q8IXI2 618 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 CBARPQ8N350 705 aaPredicted RBP5.93□□□□□ -1.46
HDDC2-207ENST00000608532 HOXB13Q92826 284 aaPredicted RBP5.93□□□□□ -1.46
HDDC2-207ENST00000608532 CHFRQ96EP1 664 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 FAXDC2Q96IV6 333 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 TTPALQ9BTX7 342 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 AKIP1Q9NQ31 210 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 SIK3Q9Y2K2 1263 aa5.93□□□□□ -1.46
HDDC2-207ENST00000608532 LPXNO60711 386 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 NDUFS2O75306 463 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 GPR32O75388 356 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 SPATA31D3P0C874 917 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
HDDC2-207ENST00000608532 SLC6A9P48067 706 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 INAVAQ3KP66 663 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 ZNF529Q6P280 563 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 LRRC55Q6ZSA7 311 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 SPATA31D4Q6ZUB0 917 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 PLXDC1Q8IUK5 500 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 VRK3Q8IV63 474 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.92□□□□□ -1.46
HDDC2-207ENST00000608532 JADE3Q92613 823 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 RAB24Q969Q5 203 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 MYOCQ99972 504 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 IKZF4Q9H2S9 585 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 MANSC1Q9H8J5 431 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 ANKFY1Q9P2R3 1169 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 SAP30BPQ9UHR5 308 aaKnown RBP5.92□□□□□ -1.46
HDDC2-207ENST00000608532 MAP3K2Q9Y2U5 619 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 CHST2Q9Y4C5 530 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 COL4A3BPQ9Y5P4 624 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 PNPLA7Q6ZV29 1317 aa5.92□□□□□ -1.46
HDDC2-207ENST00000608532 KLHL33A6NCF5 533 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 DIRC3C9JPN6 131 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 POMCP01189 267 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 PCSK1P29120 753 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 GUCY1A2P33402 732 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 INHBCP55103 352 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 DPTQ07507 201 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 PCBP2Q15366 365 aaKnown RBP eCLIP5.91□□□□□ -1.46
HDDC2-207ENST00000608532 TSHZ3Q63HK5 1081 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 UBE3BQ7Z3V4 1068 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 PNMA8AQ86V59 439 aaPredicted RBP5.91□□□□□ -1.46
HDDC2-207ENST00000608532 RPUSD2Q8IZ73 545 aaKnown RBP5.91□□□□□ -1.46
HDDC2-207ENST00000608532 AMER2Q8N7J2 671 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 NEU1Q99519 415 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 SMAD5Q99717 465 aaKnown RBP5.91□□□□□ -1.46
HDDC2-207ENST00000608532 ATP11BQ9Y2G3 1177 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 MRFAP1Q9Y605 127 aa5.91□□□□□ -1.46
HDDC2-207ENST00000608532 WDR33Q9C0J8 1336 aaKnown RBP5.91□□□□□ -1.46
HDDC2-207ENST00000608532 A0A087X1B8 175 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 CENPVL1A0A0U1RR11 272 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 SHTN1A0MZ66 631 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 UNC119BA6NIH7 251 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 RAMP2O60895 175 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 PPFIA4O75335 1185 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 C5AR1P21730 350 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 FAM102AQ5T9C2 384 aaPredicted RBP5.9□□□□□ -1.46
HDDC2-207ENST00000608532 LAIR1Q6GTX8 287 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 RHOUQ7L0Q8 258 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 MRGPRGQ86SM5 289 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 LDLRAD3Q86YD5 345 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 DRC7Q8IY82 874 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 ULK2Q8IYT8 1036 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 ZGPATQ8N5A5 531 aaKnown RBP5.9□□□□□ -1.46
HDDC2-207ENST00000608532 CPEB3Q8NE35 698 aaKnown RBP5.9□□□□□ -1.46
HDDC2-207ENST00000608532 OR56A1Q8NGH5 318 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 MYEOVQ96EZ4 313 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 CYFIP2Q96F07 1278 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 FUBP3Q96I24 572 aaKnown RBP eCLIP5.9□□□□□ -1.46
HDDC2-207ENST00000608532 CEP89Q96ST8 783 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 REXO4Q9GZR2 422 aaKnown RBP5.9□□□□□ -1.46
HDDC2-207ENST00000608532 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 PCDHA13Q9Y5I0 950 aa5.9□□□□□ -1.46
HDDC2-207ENST00000608532 MYBBP1AQ9BQG0 1328 aaKnown RBP5.9□□□□□ -1.47
HDDC2-207ENST00000608532 TMEM191CA6NGB0 347 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 ALG1L2C9J202 215 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 GABRDO14764 452 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 KIAA0391O15091 583 aaKnown RBP5.89□□□□□ -1.47
HDDC2-207ENST00000608532 TEX33O43247 280 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 PCDHGA12O60330 932 aa5.89□□□□□ -1.47
HDDC2-207ENST00000608532 AMY1AP04745 511 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms