RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ZNF677Q86XU0 584 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 MAP4K3Q8IVH8 894 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 PPM1KQ8N3J5 372 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 BBOF1Q8ND07 529 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 CKAP2Q8WWK9 683 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 SEMA4DQ92854 862 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 TRAIPQ9BWF2 469 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 TBC1D22BQ9NU19 505 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 TISP43B9A030 160 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 GAS8O95995 478 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 ICAM1P05362 532 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 PTGER2P43116 358 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 UBXN2AP68543 259 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 SNRNP35Q16560 246 aaKnown RBP13.23□□□□□ -0.29
PDE4A-207ENST00000590407 PCNX4Q63HM2 1172 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 RIBC1Q8N443 379 aaPredicted RBP13.23□□□□□ -0.29
PDE4A-207ENST00000590407 FBXL13Q8NEE6 735 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 RDM1Q8NG50 284 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 FAM151AQ8WW52 585 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 SPIRE2Q8WWL2 714 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 ARHGEF2Q92974 986 aaKnown RBP13.23□□□□□ -0.29
PDE4A-207ENST00000590407 C17orf75Q9HAS0 396 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 NEU2Q9Y3R4 380 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 ADGRA3Q8IWK6 1321 aa13.23□□□□□ -0.29
PDE4A-207ENST00000590407 TMEM120BA0PK00 339 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 SMIM23A6NLE4 172 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 CLDN3O15551 220 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ATMINO43313 823 aaPredicted RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ABHD2P08910 425 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 UNGP13051 313 aaPredicted RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 SKIV2L2P42285 1042 aaKnown RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 KCNJ1P48048 391 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 AOC3Q16853 763 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 KCTD19Q17RG1 926 aaPredicted RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 TKFCQ3LXA3 575 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 HIBCHQ6NVY1 386 aaPredicted RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 MCF2L2Q86YR7 1114 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ATL2Q8NHH9 583 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 PRMT6Q96LA8 375 aaPredicted RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 NTPCRQ9BSD7 190 aaKnown RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 DCLK3Q9C098 648 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 NOD2Q9HC29 1040 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 RAB20Q9NX57 234 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 PRKAG3Q9UGI9 489 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 TBX20Q9UMR3 447 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 PTPN22Q9Y2R2 807 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 PSME4Q14997 1843 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ADSSP30520 456 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 YWHABP31946 246 aaKnown RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ELF1P32519 619 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 NF2P35240 595 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 SLCO1A2P46721 670 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 JAK3P52333 1124 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 MAP2K1Q02750 393 aaPredicted RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 BNIP1Q12981 228 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 GRIPAP1Q4V328 841 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 FKBP1CQ5VVH2 108 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 PPP1R2P3Q6NXS1 205 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 MCOLN2Q8IZK6 566 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 TMEM161BQ8NDZ6 487 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 GIMAP7Q8NHV1 300 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 GRAMD1AQ96CP6 724 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 DDX23Q9BUQ8 820 aaKnown RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 MOV10L1Q9BXT6 1211 aaKnown RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 MTFR1LQ9H019 292 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ASIC3Q9UHC3 531 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ARL2BPQ9Y2Y0 163 aa13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ZNFX1Q9P2E3 1918 aaKnown RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 ASTN2O75129 1339 aaPredicted RBP13.22□□□□□ -0.29
PDE4A-207ENST00000590407 PSTPIP1O43586 416 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 ATF2P15336 505 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 MAPK4P31152 587 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 SFNP31947 248 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 ABCD1P33897 745 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 BPIFB4P59827 614 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 NCALDP61601 193 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 PSMC5P62195 406 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 CYP24A1Q07973 514 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 CCDC15Q0P6D6 951 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 KLF1Q13351 362 aaPredicted RBP13.21□□□□□ -0.29
PDE4A-207ENST00000590407 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 STAT4Q14765 748 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 CCNG2Q16589 344 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 TLDC1Q6P9B6 456 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 PPP1R21Q6ZMI0 780 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 ZSWIM2Q8NEG5 633 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 CLEC4DQ8WXI8 215 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 KCNN1Q92952 543 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 FAM212AQ96EL1 285 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.29
PDE4A-207ENST00000590407 BTBD6Q96KE9 485 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 MAGEB18Q96M61 343 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 EBF2Q9HAK2 575 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 ABCF3Q9NUQ8 709 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms