RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 IRF2BP2Q7Z5L9 587 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 CBWD2Q8IUF1 395 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 EXOC8Q8IYI6 725 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 SLC35F6Q8N357 371 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 MYLIPQ8WY64 445 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 HERVK_113Q902F9 699 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 JAKMIP2Q96AA8 810 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 TIFAQ96CG3 184 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 CCDC42Q96M95 316 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 KATNAL1Q9BW62 490 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
VPS25-205ENST00000590339 TSGA10Q9BZW7 698 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 CCDC113Q9H0I3 377 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 MTIF3Q9H2K0 278 aaKnown RBP10.2□□□□□ -0.78
VPS25-205ENST00000590339 SMARCAD1Q9H4L7 1026 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 TRIM10Q9UDY6 481 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 GTF2IRD1Q9UHL9 959 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 STXBP5LQ9Y2K9 1186 aa10.2□□□□□ -0.78
VPS25-205ENST00000590339 ANK1P16157 1881 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 COL1A2P08123 1366 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 F8VZ95 297 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 H3BRB1 525 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 HAS3O00219 553 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 HNRNPDLO14979 420 aaKnown RBP10.19□□□□□ -0.78
VPS25-205ENST00000590339 HBP1O60381 514 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 IPO7O95373 1038 aaKnown RBP10.19□□□□□ -0.78
VPS25-205ENST00000590339 SLU7O95391 586 aaKnown RBP10.19□□□□□ -0.78
VPS25-205ENST00000590339 F2P00734 622 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 LGALS2P05162 132 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 EDN1P05305 212 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 MXI1P50539 228 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 RABGGTBP53611 331 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 CYP24A1Q07973 514 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 DRP2Q13474 957 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 HIC1Q14526 733 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 SPA17Q15506 151 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 TDRD12Q587J7 1177 aaKnown RBP10.19□□□□□ -0.78
VPS25-205ENST00000590339 RASIP1Q5U651 963 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 KIAA1328Q86T90 577 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 SESTD1Q86VW0 696 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 GPD1LQ8N335 351 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 LINC01465Q8N7H1 131 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 EHBP1Q8NDI1 1231 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 DEPTORQ8TB45 409 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 PARD3BQ8TEW8 1205 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 TCP11Q8WWU5 503 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 GLG1Q92896 1179 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 VWCEQ96DN2 955 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 JPH2Q9BR39 696 aaPredicted RBP10.19□□□□□ -0.78
VPS25-205ENST00000590339 C16orf70Q9BSU1 422 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 SYT11Q9BT88 431 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 PBX4Q9BYU1 374 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 GPR88Q9GZN0 384 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 LACRTQ9GZZ8 138 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 TUT1Q9H6E5 874 aaKnown RBP10.19□□□□□ -0.78
VPS25-205ENST00000590339 APEX2Q9UBZ4 518 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 MSRAQ9UJ68 235 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 COQ4Q9Y3A0 265 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 PCDHA13Q9Y5I0 950 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 MRFAP1Q9Y605 127 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 BZW2Q9Y6E2 419 aaKnown RBP10.19□□□□□ -0.78
VPS25-205ENST00000590339 SLC4A7Q9Y6M7 1214 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 SZT2Q5T011 3432 aa10.19□□□□□ -0.78
VPS25-205ENST00000590339 GOLGA8IPA6NC78 632 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 LRRIQ4A6NIV6 560 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 GOLGA8JA6NMD2 632 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 LRRIQ3A6PVS8 624 aaPredicted RBP10.18□□□□□ -0.78
VPS25-205ENST00000590339 KRT86O43790 486 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 EXTL3O43909 919 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 AKR1B10O60218 316 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 GFPT2O94808 682 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 C22orf31O95567 290 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 MYOGP15173 224 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 FERP16591 822 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 MARK3P27448 753 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 GTF2H1P32780 548 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 LIG4P49917 911 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 CLDN10P78369 228 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 AMPD2Q01433 879 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 CYP27A1Q02318 531 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 KLHL30Q0D2K2 578 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 STRN3Q13033 797 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 HSP90AA2PQ14568 343 aaPredicted RBP10.18□□□□□ -0.78
VPS25-205ENST00000590339 GRIN2CQ14957 1233 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 SLC18A3Q16572 532 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 ZNF484Q5JVG2 852 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 ZNF569Q5MCW4 686 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 CCDC122Q5T0U0 273 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 GJB7Q6PEY0 223 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 ZPBP2Q6X784 338 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 FMNL3Q8IVF7 1028 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 RDH13Q8NBN7 331 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 POMGNT1Q8WZA1 660 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 DHX38Q92620 1227 aaKnown RBP10.18□□□□□ -0.78
VPS25-205ENST00000590339 WNT8BQ93098 351 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 SAAL1Q96ER3 474 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 SPAG5Q96R06 1193 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 NAPGQ99747 312 aaPredicted RBP10.18□□□□□ -0.78
VPS25-205ENST00000590339 STK33Q9BYT3 514 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 IFIH1Q9BYX4 1025 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms