RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 KXD1Q9BQD3 176 aa12.87□□□□□ -0.35
CAPNS1-209ENST00000590049 RNF19AQ9NV58 838 aa12.87□□□□□ -0.35
CAPNS1-209ENST00000590049 RTEL1Q9NZ71 1219 aa12.87□□□□□ -0.35
CAPNS1-209ENST00000590049 TFIP11Q9UBB9 837 aaKnown RBP12.87□□□□□ -0.35
CAPNS1-209ENST00000590049 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
CAPNS1-209ENST00000590049 CARNS1A5YM72 827 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 YEATS4O95619 227 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 MCM7P33993 719 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 SREBF1P36956 1147 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 CSRP3P50461 194 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 ZNF174Q15697 407 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 ODR4Q5SWX8 454 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 CLEC17AQ6ZS10 378 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 TMEM173Q86WV6 379 aaPredicted RBP12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 PXMP2Q9NR77 195 aa12.86□□□□□ -0.35
CAPNS1-209ENST00000590049 FBN2P35556 2912 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 C2CD2LO14523 706 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 ADAMTS3O15072 1205 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 SPTLC2O15270 562 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 RPS6KA5O75582 802 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 MYCLP12524 364 aaPredicted RBP12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 NASPP49321 788 aaPredicted RBP12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 CREB5Q02930 508 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 MOXD1Q6UVY6 613 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 PIP4K2CQ8TBX8 421 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 SPIRE2Q8WWL2 714 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 DNASE1L2Q92874 299 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 IGSF21Q96ID5 467 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 PRORYQ9H606 182 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 PCDHB6Q9Y5E3 794 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 CLIC4Q9Y696 253 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 RELNP78509 3460 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 ASCC3Q8N3C0 2202 aaKnown RBP12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 DOPEY2Q9Y3R5 2298 aa12.85□□□□□ -0.35
CAPNS1-209ENST00000590049 LAD1O00515 517 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 KHNYNO15037 678 aaKnown RBP12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 NEMFO60524 1076 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 AKAP3O75969 853 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 GLUD1P00367 558 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 MYBP10242 640 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 CHRNB1P11230 501 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 CCND2P30279 289 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 ME1P48163 572 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 TOB1P50616 345 aaPredicted RBP12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 KRT76Q01546 638 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 NBR1Q14596 966 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 PPP4R3AQ6IN85 833 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 METTL7BQ6UX53 244 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 LEO1Q8WVC0 666 aaPredicted RBP12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 FAM3CQ92520 227 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 MRPL9Q9BYD2 267 aaKnown RBP12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 STK39Q9UEW8 545 aa12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 DDX25Q9UHL0 483 aaKnown RBP12.84□□□□□ -0.35
CAPNS1-209ENST00000590049 BCLAF3A2AJT9 711 aaKnown RBP12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 GPR182O15218 404 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 PPP6R2O75170 966 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 ADH1AP07327 375 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 CYP3A4P08684 503 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 GP1BBP13224 206 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 SLC39A14Q15043 492 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 PGM5Q15124 567 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 CALCRLQ16602 461 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 PCNX4Q63HM2 1172 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 PIP4P1Q86T03 277 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 NLRX1Q86UT6 975 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 LINC00301Q8NCQ3 95 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 FGF13Q92913 245 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 PDCD2LQ9BRP1 358 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 MRPL17Q9NRX2 175 aaKnown RBP12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 RCOR1Q9UKL0 485 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 ST3GAL5Q9UNP4 418 aa12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 NOC2LQ9Y3T9 749 aaKnown RBP12.83□□□□□ -0.36
CAPNS1-209ENST00000590049 CCDC163A0A0D9SF12 145 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 B8ZZF3 427 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 ZC3H11AO75152 810 aaKnown RBP eCLIP12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 STAM2O75886 525 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 TDP2O95551 362 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 SSBP05455 408 aaKnown RBP eCLIP12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 MARCKSP29966 332 aaPredicted RBP12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 CIITAP33076 1130 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 MCM4P33991 863 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 IGBP1P78318 339 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 PTGDRQ13258 359 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 LRRC32Q14392 662 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 NEDD9Q14511 834 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 ELF2Q15723 593 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 PLK5Q496M5 336 aa12.82□□□□□ -0.36
CAPNS1-209ENST00000590049 PRR16Q569H4 304 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms