RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 HDXQ7Z353 690 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 RPUSD2Q8IZ73 545 aaKnown RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 KRT222Q8N1A0 295 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 RNF149Q8NC42 400 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 ZSWIM2Q8NEG5 633 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 SLC35G2Q8TBE7 412 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 CAPZA3Q96KX2 299 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 KREMEN1Q96MU8 473 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 RPS6KC1Q96S38 1066 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 NAP1L3Q99457 506 aaPredicted RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 TCHPQ9BT92 498 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 ACBD3Q9H3P7 528 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 PRDM10Q9NQV6 1147 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 TTC7AQ9ULT0 858 aaPredicted RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 CNTNAP2Q9UHC6 1331 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 ARID2Q68CP9 1835 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 RRN3P2A6NIE6 340 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 MIF4GDA9UHW6 222 aaKnown RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 ZBTB42B2RXF5 422 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 CCDC188H7C350 402 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 PHACTR2O75167 634 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 CLSTN1O94985 981 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 IL18RAPO95256 599 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 HLA-DRAP01903 254 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 FTLP02792 175 aaPredicted RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 LGALS2P05162 132 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 RHOXF2BP0C7M4 288 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 SRGAP2CP0DJJ0 459 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 PROZP22891 400 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 MARK3P27448 753 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 USP8P40818 1118 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 RGS19P49795 217 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 YWHAEP62258 255 aaKnown RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 TNNC1P63316 161 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 FAM193AP78312 1265 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 BIRC3Q13489 604 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 DUOXA2Q1HG44 320 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 SGSM1Q2NKQ1 1148 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 ACAD10Q6JQN1 1059 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 C11orf63Q6NUN7 778 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 NFRKBQ6P4R8 1299 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 MPZL3Q6UWV2 235 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 APBB1IPQ7Z5R6 666 aaPredicted RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 NOA1Q8NC60 698 aaKnown RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 OLIG1Q8TAK6 271 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 COG1Q8WTW3 980 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS25-203ENST00000589520 POP1Q99575 1024 aaKnown RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 RHOXF2Q9BQY4 288 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 TINF2Q9BSI4 451 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 R3HDMLQ9H3Y0 253 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 FAM124BQ9H5Z6 455 aaPredicted RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 PTPRHQ9HD43 1115 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 ABCB6Q9NP58 842 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 PDGFCQ9NRA1 345 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 SEPT11Q9NVA2 429 aaKnown RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 UVRAGQ9P2Y5 699 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 LCMT1Q9UIC8 334 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 NOCTQ9UK39 431 aaKnown RBP11.17□□□□□ -0.62
VPS25-203ENST00000589520 CNTN6Q9UQ52 1028 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 TNFSF13BQ9Y275 285 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 STXBP5LQ9Y2K9 1186 aa11.17□□□□□ -0.62
VPS25-203ENST00000589520 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
VPS25-203ENST00000589520 ZNF185O15231 689 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 CYP26A1O43174 497 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 ZEB2O60315 1214 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 B4GALT4O60513 344 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 SGPL1O95470 568 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 C22orf31O95567 290 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 SNAI1O95863 264 aaPredicted RBP11.16□□□□□ -0.62
VPS25-203ENST00000589520 FTCDO95954 541 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 INSRRP14616 1297 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 TNFRSF8P28908 595 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 PIK3CAP42336 1068 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 ACOT2P49753 483 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 CUL2Q13617 745 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 DGKDQ16760 1214 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 LONRF2Q1L5Z9 754 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 BEND6Q5SZJ8 279 aaPredicted RBP11.16□□□□□ -0.62
VPS25-203ENST00000589520 ATF7IP2Q5U623 682 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 DAAM2Q86T65 1068 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 NT5DC3Q86UY8 548 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 RHPN2Q8IUC4 686 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 RASGEF1CQ8N431 466 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 EIF1ADQ8N9N8 165 aaKnown RBP11.16□□□□□ -0.62
VPS25-203ENST00000589520 ZNF516Q92618 1163 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 TATDN2Q93075 761 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 HES6Q96HZ4 224 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 VCPIP1Q96JH7 1222 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 MAML3Q96JK9 1138 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 KATNBL1Q9H079 304 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 VIPAS39Q9H9C1 493 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 PDE11AQ9HCR9 933 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 ANKFY1Q9P2R3 1169 aa11.16□□□□□ -0.62
VPS25-203ENST00000589520 CPSF3Q9UKF6 684 aaKnown RBP11.16□□□□□ -0.62
VPS25-203ENST00000589520 GTF3C4Q9UKN8 822 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms