RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PRKCIP41743 596 aa14.58□□□□□ -0.08
NDEL1-204ENST00000578172 KCNT1Q5JUK3 1230 aa14.58□□□□□ -0.08
NDEL1-204ENST00000578172 CYP4A22Q5TCH4 519 aa14.58□□□□□ -0.08
NDEL1-204ENST00000578172 ZBTB10Q96DT7 871 aa14.58□□□□□ -0.08
NDEL1-204ENST00000578172 PPP1R12CQ9BZL4 782 aa14.58□□□□□ -0.08
NDEL1-204ENST00000578172 PABPC3Q9H361 631 aaKnown RBP14.58□□□□□ -0.08
NDEL1-204ENST00000578172 EXOC7Q9UPT5 735 aa14.58□□□□□ -0.08
NDEL1-204ENST00000578172 DNM1LO00429 736 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 WEE2P0C1S8 567 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 JAM2P57087 298 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 CALR3Q96L12 384 aaKnown RBP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 SERPINA10Q9UK55 444 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 TRIM33Q9UPN9 1127 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 RIPK3Q9Y572 518 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 KIAA0391O15091 583 aaKnown RBP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 ZBTB7AO95365 584 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 ASNSP08243 561 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 RFX8Q6ZV50 586 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 TMEM130Q8N3G9 435 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 PRPF38AQ8NAV1 312 aaKnown RBP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 IMPG2Q9BZV3 1241 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 POLR3FQ9H1D9 316 aaPredicted RBP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 ABCF3Q9NUQ8 709 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 XIRP1Q702N8 1843 aaKnown RBP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 MARSP56192 900 aaKnown RBP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 SNCBQ16143 134 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 CDO1Q16878 200 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 OSBPL7Q9BZF2 842 aa14.57□□□□□ -0.08
NDEL1-204ENST00000578172 R3HDM2Q9Y2K5 976 aaKnown RBP14.57□□□□□ -0.08
NDEL1-204ENST00000578172 CLGNO14967 610 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 EIF3DO15371 548 aaKnown RBP eCLIP14.56□□□□□ -0.08
NDEL1-204ENST00000578172 TLR3O15455 904 aaKnown RBP14.56□□□□□ -0.08
NDEL1-204ENST00000578172 KRT1P04264 644 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 ANKRD35Q8N283 1001 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 NSRP1Q9H0G5 558 aaKnown RBP14.56□□□□□ -0.08
NDEL1-204ENST00000578172 MAGED2Q9UNF1 606 aaPredicted RBP14.56□□□□□ -0.08
NDEL1-204ENST00000578172 MYH11P35749 1972 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 CHRNA3P32297 505 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 CETN2P41208 172 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 NOP14P78316 857 aaKnown RBP14.56□□□□□ -0.08
NDEL1-204ENST00000578172 TRAF1Q13077 416 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 TATDN1Q6P1N9 297 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 KCNV1Q6PIU1 500 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 TAOK1Q7L7X3 1001 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 ZDHHC14Q8IZN3 488 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 BSNDQ8WZ55 320 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 PRCCQ92733 491 aaPredicted RBP14.56□□□□□ -0.08
NDEL1-204ENST00000578172 KLHL29Q96CT2 875 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 DCTN4Q9UJW0 460 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 TBX20Q9UMR3 447 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 FRMPD4Q14CM0 1322 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 RASA4BC9J798 803 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 RASA4O43374 803 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 CAP2P40123 477 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 NT5C2P49902 561 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 TTLL12Q14166 644 aaPredicted RBP14.56□□□□□ -0.08
NDEL1-204ENST00000578172 SLC27A3Q5K4L6 730 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 ZBTB41Q5SVQ8 909 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 SYTL5Q8TDW5 730 aaPredicted RBP14.56□□□□□ -0.08
NDEL1-204ENST00000578172 SUFUQ9UMX1 484 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 MYH4Q9Y623 1939 aa14.56□□□□□ -0.08
NDEL1-204ENST00000578172 K7ERI5 159 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 SCTRP47872 440 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 IRX4P78413 519 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 MRPS9P82933 396 aaKnown RBP14.55□□□□□ -0.08
NDEL1-204ENST00000578172 NEDD9Q14511 834 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 IZUMO3Q5VZ72 239 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 BSPRYQ5W0U4 402 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 GMCL1P1Q8NEA9 526 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 NLRP4Q96MN2 994 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 C12orf65Q9H3J6 166 aaKnown RBP14.55□□□□□ -0.08
NDEL1-204ENST00000578172 KIF9Q9HAQ2 790 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 EXOC1LA0A1B0GW35 172 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 WDR64B1ANS9 1081 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 TRAPPC3O43617 180 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 MYO1EQ12965 1108 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 SCYL2Q6P3W7 929 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 LRRC71Q8N4P6 559 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 SLC17A8Q8NDX2 589 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 WRNIP1Q96S55 665 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 MSTO1Q9BUK6 570 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 HOMER3Q9NSC5 361 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 SEL1LQ9UBV2 794 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 VIL1P09327 827 aaKnown RBP14.55□□□□□ -0.08
NDEL1-204ENST00000578172 GNA15P30679 374 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 FMO1Q01740 532 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 GPS1Q13098 491 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 P3H1Q32P28 736 aa14.55□□□□□ -0.08
NDEL1-204ENST00000578172 RSBN1LQ6PCB5 846 aaPredicted RBP14.55□□□□□ -0.08
NDEL1-204ENST00000578172 MSL3Q8N5Y2 521 aaKnown RBP14.55□□□□□ -0.08
NDEL1-204ENST00000578172 CIITAP33076 1130 aa14.54□□□□□ -0.08
NDEL1-204ENST00000578172 ZNF131P52739 623 aa14.54□□□□□ -0.08
NDEL1-204ENST00000578172 PSMC5P62195 406 aa14.54□□□□□ -0.08
NDEL1-204ENST00000578172 DNAJC3Q13217 504 aa14.54□□□□□ -0.08
NDEL1-204ENST00000578172 TRPC3Q13507 836 aa14.54□□□□□ -0.08
NDEL1-204ENST00000578172 PICK1Q9NRD5 415 aa14.54□□□□□ -0.08
NDEL1-204ENST00000578172 HERC5Q9UII4 1024 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms