RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 PCIF1Q9H4Z3 704 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 PARVGQ9HBI0 331 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 AIPL1Q9NZN9 384 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.8□□□□□ -1.48
VAPA-203ENST00000577539 RNF14Q9UBS8 474 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 NAGPAQ9UK23 515 aa5.8□□□□□ -1.48
VAPA-203ENST00000577539 CYP3A7-CYP3A51PA0A087WV96 503 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 GOLGA8KD6RF30 607 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 TBX3O15119 743 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 RAD17O75943 681 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 PDGFRBP09619 1106 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 TNFAIP3P21580 790 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 CYP3A7P24462 503 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 PSMC2P35998 433 aaKnown RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 PLEKHG4Q58EX7 1191 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 ODF2Q5BJF6 829 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 CEP85LQ5SZL2 805 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 PCNX4Q63HM2 1172 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 STXBP4Q6ZWJ1 553 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 SLITRK4Q8IW52 837 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 CASKIN2Q8WXE0 1202 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 RPS6KC1Q96S38 1066 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.79□□□□□ -1.48
VAPA-203ENST00000577539 DPH5Q9H2P9 285 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 HOMER2Q9NSB8 354 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 FBXO28Q9NVF7 368 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 DNAJC12Q9UKB3 198 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 SCAF8Q9UPN6 1271 aaKnown RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 BZW2Q9Y6E2 419 aaKnown RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 DDX60LQ5H9U9 1706 aaKnown RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 SPATA31A6Q5VVP1 1343 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 MAST2Q6P0Q8 1798 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 CFAP69A5D8W1 941 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 EBAG9O00559 213 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 ARSDP51689 593 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 ITIH3Q06033 890 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 SPIRE1Q08AE8 756 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 MCTP2Q6DN12 878 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 IRF2BP2Q7Z5L9 587 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 LMBR1Q8WVP7 490 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 UBLCP1Q8WVY7 318 aaPredicted RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 CTNNBL1Q8WYA6 563 aaPredicted RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 SLC35C1Q96A29 364 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 LENG9Q96B70 501 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 ZNF577Q9BSK1 485 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 TRAF3IP3Q9Y228 551 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 NDUFAB1O14561 156 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 KRT13P13646 458 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 GAP43P17677 238 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 HOXD13P35453 343 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 SLC19A1P41440 591 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 IRAK1P51617 712 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 DRAP1Q14919 205 aaPredicted RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 Q4G0T1 1027 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 GLE1Q53GS7 698 aaKnown RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 WDR44Q5JSH3 913 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 ALS2CLQ60I27 953 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 MOXD1Q6UVY6 613 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 ZNF438Q7Z4V0 828 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 USP38Q8NB14 1042 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 HOOK2Q96ED9 719 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 FAM126AQ9BYI3 521 aaPredicted RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 EHMT1Q9H9B1 1298 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 FEZ2Q9UHY8 353 aaPredicted RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 AJAP1Q9UKB5 411 aaPredicted RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 CTDP1Q9Y5B0 961 aaPredicted RBP5.79□□□□□ -1.48
VAPA-203ENST00000577539 PCDHGC5Q9Y5F6 944 aa5.79□□□□□ -1.48
VAPA-203ENST00000577539 KLRG2A4D1S0 409 aaPredicted RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 RBAK-RBAKDNI3L0D1 243 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 K7ENM7 598 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 PGRMC1O00264 195 aaKnown RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 CELA3AP09093 270 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 FERP16591 822 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 POLD1P28340 1107 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 HSPA1LP34931 641 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 GALCP54803 685 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 RRP1BQ14684 758 aaKnown RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 EPHA7Q15375 998 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 DLGAP5Q15398 846 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 CACTIN-AS1Q8N1I8 211 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 METTL13Q8N6R0 699 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 GMCL1Q96IK5 515 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 INPP4AQ96PE3 977 aaPredicted RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 SENP7Q9BQF6 1050 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 IER2Q9BTL4 223 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 WDR18Q9BV38 432 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 IDI2Q9BXS1 227 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 LRRC3Q9BY71 257 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 AMACRQ9UHK6 382 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 AMFRQ9UKV5 643 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 NOC2LQ9Y3T9 749 aaKnown RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 ASTN1O14525 1302 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 DDX3XO00571 662 aaKnown RBP eCLIP5.78□□□□□ -1.48
VAPA-203ENST00000577539 SART1O43290 800 aaKnown RBP5.78□□□□□ -1.48
VAPA-203ENST00000577539 SLITRK3O94933 977 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 ARP10275 920 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 ITPKAP23677 461 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 PRELPP51888 382 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 MYL7Q01449 175 aa5.78□□□□□ -1.48
VAPA-203ENST00000577539 LLGL1Q15334 1064 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms