RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 DNAJC19Q96DA6 116 aa10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 SPATA32Q96LK8 384 aa10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 C2orf49Q9BVC5 232 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 EIF2AQ9BY44 585 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 NFKBIZQ9BYH8 718 aa10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 FGFBP2Q9BYJ0 223 aa10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 IKZF4Q9H2S9 585 aa10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 CFAP45Q9UL16 551 aa10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 PIN4Q9Y237 131 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-219ENST00000576713 TMEM265A0A087WTH1 108 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 A0A1B0GVL5 298 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 INO80B-WBP1J3KQ70 363 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 DGKIO75912 1065 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 FGFR1P11362 822 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 ARF4P18085 180 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 NAMPTP43490 491 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 PHKA2P46019 1235 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 AFF1P51825 1210 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 NUCB2P80303 420 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 TAP1Q03518 808 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 POU5F1BQ06416 359 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 WDR44Q5JSH3 913 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 RRAGBQ5VZM2 374 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 EEF1DP3Q658K8 133 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 DYMQ7RTS9 669 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 SRGAP1Q7Z6B7 1085 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 RASSF8Q8NHQ8 419 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 KIFAP3Q92845 792 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 LPPQ93052 612 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 DHX58Q96C10 678 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 TIFAQ96CG3 184 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 ZNF689Q96CS4 500 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 FTHL17Q9BXU8 183 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 INO80BQ9C086 356 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 CXCL16Q9H2A7 254 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 SEMA6BQ9H3T3 888 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 FZD8Q9H461 694 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 CERS4Q9HA82 394 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 HPSEQ9Y251 543 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 STXBP5LQ9Y2K9 1186 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 PCDHA11Q9Y5I1 949 aa10.44□□□□□ -0.74
NPLOC4-219ENST00000576713 SERTM1A2A2V5 107 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 DENND3A2RUS2 1198 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 LINC01553A4QN01 128 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 RFXAPO00287 272 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 SLC16A4O15374 487 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 POLR2DO15514 142 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 MAN1A2O60476 641 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 B4GALT3O60512 393 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 EFCAB14O75071 495 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 PFKFB1P16118 471 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 RHOQP17081 205 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 LIG1P18858 919 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 SFPQP23246 707 aaKnown RBP eCLIP10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 SCNN1AP37088 669 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 STAT6P42226 847 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 SARSP49591 514 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 NDUFA8P51970 172 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 ZNF131P52739 623 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 CDC42EP1Q00587 391 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 TFDP1Q14186 410 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 GRIN2CQ14957 1233 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 PAN2Q504Q3 1202 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 CLLU1OSQ5K130 101 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 SH3PXD2AQ5TCZ1 1133 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 NT5DC1Q5TFE4 455 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 SLC24A5Q71RS6 500 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 ECHDC2Q86YB7 292 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 KCTD17Q8N5Z5 321 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 SMG8Q8ND04 991 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 TMEM161BQ8NDZ6 487 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 GLIS3Q8NEA6 775 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 HPS3Q969F9 1004 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 RAD9AQ99638 391 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 C17orf80Q9BSJ5 609 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 ARHGAP28Q9P2N2 729 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 STK17AQ9UEE5 414 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 HES2Q9Y543 173 aa10.43□□□□□ -0.74
NPLOC4-219ENST00000576713 CNTNAP2Q9UHC6 1331 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 COL4A4P53420 1690 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 TTC3P53804 2025 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 A0A0U1RQF3 1178 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 FAM237AA0A1B0GTK4 181 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 CCDC169A6NNP5 214 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 SOBPA7XYQ1 873 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 ABLIM1O14639 778 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 GADD45BO75293 160 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 PRKCBP05771 671 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 MAPTP10636 758 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 PLS3P13797 630 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 CMA1P23946 247 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 NMT1P30419 496 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 CASP5P51878 434 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 NCKAP1LP55160 1127 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 RAB30Q15771 203 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 ADALQ6DHV7 355 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 AGMOQ6ZNB7 445 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 LRRC55Q6ZSA7 311 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms