RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 NSUN3Q9H649 340 aaKnown RBP10.11□□□□□ -0.79
CFDP1-206ENST00000566254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.11□□□□□ -0.79
CFDP1-206ENST00000566254 TRIP12Q14669 1992 aaPredicted RBP10.11□□□□□ -0.79
CFDP1-206ENST00000566254 PLIN4Q96Q06 1357 aa10.11□□□□□ -0.79
CFDP1-206ENST00000566254 CCDC171Q6TFL3 1326 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 SALL3Q9BXA9 1300 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 CFAP54Q96N23 3096 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 TECTAO75443 2155 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 KRBA1A5PL33 1030 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 H3BNC9 293 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 PLA2G6O60733 806 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 EFCAB14O75071 495 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 PARNO95453 639 aaKnown RBP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 HSPD1P10809 573 aaKnown RBP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 MAP4P27816 1152 aaKnown RBP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 HTRA4P83105 476 aaPredicted RBP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 DLX2Q07687 328 aaPredicted RBP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 GPM6BQ13491 265 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 MAP7Q14244 749 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 ALX1Q15699 326 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 SMAD2Q15796 467 aaKnown RBP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 BBS9Q3SYG4 887 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 ZNF618Q5T7W0 954 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 CWC27Q6UX04 472 aaKnown RBP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 SESTD1Q86VW0 696 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 PPFIBP1Q86W92 1011 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 CHD1LQ86WJ1 897 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 FAM20CQ8IXL6 584 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 LILRB2Q8N423 598 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 ST13P5Q8NFI4 369 aaPredicted RBP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 DNAJB8Q8NHS0 232 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 DCAF4Q8WV16 495 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 AFG1LQ8WV93 481 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 KAT2BQ92831 832 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 EDAQ92838 391 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.1□□□□□ -0.79
CFDP1-206ENST00000566254 IL17RBQ9NRM6 502 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 GTF2IRD1Q9UHL9 959 aa10.1□□□□□ -0.79
CFDP1-206ENST00000566254 LOC102724159A0A0B4J2E5 919 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 TMEM221A6NGB7 291 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 M0R296 226 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 ZNF213O14771 459 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 FOXP2O15409 715 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 MBTPS2O43462 519 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 ORC4O43929 436 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 CLEC3AO75596 197 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 AMHP03971 560 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 MMP3P08254 477 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 TOP1P11387 765 aaKnown RBP10.09□□□□□ -0.79
CFDP1-206ENST00000566254 SDSP20132 328 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 EDNRBP24530 442 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 PWP2Q15269 919 aaKnown RBP10.09□□□□□ -0.79
CFDP1-206ENST00000566254 TRIM71Q2Q1W2 868 aaKnown RBP10.09□□□□□ -0.79
CFDP1-206ENST00000566254 MTERF2Q49AM1 385 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 SYDE2Q5VT97 1194 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 BMP8AQ7Z5Y6 402 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 ZNF589Q86UQ0 364 aaPredicted RBP10.09□□□□□ -0.79
CFDP1-206ENST00000566254 SUGP1Q8IWZ8 645 aaKnown RBP10.09□□□□□ -0.79
CFDP1-206ENST00000566254 DBF4BQ8NFT6 615 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 YME1L1Q96TA2 773 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 MIPEPQ99797 713 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 RANBP17Q9H2T7 1088 aaKnown RBP10.09□□□□□ -0.79
CFDP1-206ENST00000566254 RNF41Q9H4P4 317 aaPredicted RBP10.09□□□□□ -0.79
CFDP1-206ENST00000566254 HDAC6Q9UBN7 1215 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 ANAPC4Q9UJX5 808 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 CEP131Q9UPN4 1083 aa10.09□□□□□ -0.79
CFDP1-206ENST00000566254 FAM95CA0A1B0GW59 222 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 STXBP3O00186 592 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 DHX16O60231 1041 aaKnown RBP10.08□□□□□ -0.8
CFDP1-206ENST00000566254 CSPG5O95196 566 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 IGHDP01880 384 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 ZNF200P98182 395 aaPredicted RBP10.08□□□□□ -0.8
CFDP1-206ENST00000566254 HYAL1Q12794 435 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 LY6KQ17RY6 165 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 LETMD1Q6P1Q0 360 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 RNF207Q6ZRF8 634 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 CHST3Q7LGC8 479 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 C7orf31Q8N865 590 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 CLEC4DQ8WXI8 215 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 ESR2Q92731 530 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 ZNF669Q96BR6 464 aaPredicted RBP10.08□□□□□ -0.8
CFDP1-206ENST00000566254 SAMD11Q96NU1 681 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 TMEM47Q9BQJ4 181 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 ALG1Q9BT22 464 aa10.08□□□□□ -0.8
CFDP1-206ENST00000566254 SSBP4Q9BWG4 385 aaPredicted RBP10.08□□□□□ -0.8
CFDP1-206ENST00000566254 ALG13Q9NP73 1137 aaKnown RBP10.08□□□□□ -0.8
CFDP1-206ENST00000566254 C5orf42Q9H799 3197 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 TRIOO75962 3097 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 C9IYK1 514 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 HIP1O00291 1037 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 LINC01565O15544 149 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 SUSD5O60279 629 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 TBX10O75333 385 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 SLITRK5O94991 958 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 CHRNA4P43681 627 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 RPS6P62753 249 aaKnown RBP10.07□□□□□ -0.8
CFDP1-206ENST00000566254 NUCB1Q02818 461 aa10.07□□□□□ -0.8
CFDP1-206ENST00000566254 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
CFDP1-206ENST00000566254 TDRD10Q5VZ19 366 aaKnown RBP10.07□□□□□ -0.8
CFDP1-206ENST00000566254 CCDC62Q6P9F0 684 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms