RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	MT-CO1	P00395	513 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CCND1	P24385	295 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MC4R	P32245	332 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CACNB2	Q08289	660 aa	Predicted RBP	7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PRKG1	Q13976	671 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PDCD1	Q15116	288 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PTPN21	Q16825	1174 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	VASN	Q6EMK4	673 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TIGD7	Q6NT04	549 aa	Predicted RBP	7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PGM2L1	Q6PCE3	622 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TMC5	Q6UXY8	1006 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ZBTB46	Q86UZ6	589 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CILP2	Q8IUL8	1156 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PHYKPL	Q8IUZ5	450 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	RAVER1	Q8IY67	606 aa	Known RBP	7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CBARP	Q8N350	705 aa	Predicted RBP	7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911		Q8N3U1	123 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CPA5	Q8WXQ8	436 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FOXRED1	Q96CU9	486 aa	Predicted RBP	7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	RNF38	Q9H0F5	515 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	KCNK12	Q9HB15	430 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MYOZ2	Q9NPC6	264 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	BTBD7	Q9P203	1132 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	USP36	Q9P275	1121 aa	Known RBP	7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PCDHAC2	Q9Y5I4	1007 aa		7.33	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ZNF646	O15015	1829 aa	Predicted RBP	7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	COL6A3	P12111	3177 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MYOCOS	A0A1B0GUC4	107 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PEX10	O60683	326 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PTGS1	P23219	599 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MC3R	P41968	323 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	RPS8	P62241	208 aa	Known RBP	7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PFKP	Q01813	784 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MLANA	Q16655	118 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TTC38	Q5R3I4	469 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ESPNL	Q6ZVH7	1005 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	RTN4RL1	Q86UN2	441 aa	Predicted RBP	7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PNISR	Q8TF01	805 aa	Known RBP	7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CHMP4C	Q96CF2	233 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	GCC1	Q96CN9	775 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CLMN	Q96JQ2	1002 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PTPN18	Q99952	460 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ANO3	Q9BYT9	981 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TMX4	Q9H1E5	349 aa	Predicted RBP	7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SEMA4A	Q9H3S1	761 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	POFUT1	Q9H488	388 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CNTD2	Q9H8S5	307 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FAN1	Q9Y2M0	1017 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TRIM17	Q9Y577	477 aa		7.32	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SSC5D	A1L4H1	1573 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	LRRC10B	A6NIK2	292 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ZNF839	A8K0R7	811 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911		H0YGN5	161 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	WNT10B	O00744	389 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ZNF609	O15014	1411 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CFB	P00751	764 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	C8B	P07358	591 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CYP2C8	P10632	490 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PFKL	P17858	780 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FKBP1B	P68106	108 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SLC6A3	Q01959	620 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MCL1	Q07820	350 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	INAVA	Q3KP66	663 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	DACT2	Q5SW24	774 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PRAMEF9	Q5VWM5	478 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	LIPI	Q6XZB0	460 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PROSER1	Q86XN7	944 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FMNL3	Q8IVF7	1028 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	AMOTL1	Q8IY63	956 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	AGBL3	Q8NEM8	1001 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CD99L2	Q8TCZ2	262 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	IGDCC4	Q8TDY8	1250 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	TGFBRAP1	Q8WUH2	860 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	LMBR1	Q8WVP7	490 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ZBED3	Q96IU2	234 aa	Predicted RBP	7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	INCENP	Q9NQS7	918 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MKS1	Q9NXB0	559 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MBD1	Q9UIS9	605 aa	Predicted RBP	7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	NUDC	Q9Y266	331 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	PTPN22	Q9Y2R2	807 aa		7.31	□□□□□ -1.24
HERPUD1-208	ENST00000563911	IRS2	Q9Y4H2	1338 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911		A0A0C4DFX4	3053 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	NFIB	O00712	420 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	UFL1	O94874	794 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SASH1	O94885	1247 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CLEC2L	P0C7M8	214 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ATF2	P15336	505 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	KLRK1	P26718	216 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	RAB27A	P51159	221 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CDR1	P51861	262 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	ROM1	Q03395	351 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	CXorf67	Q86X51	503 aa	Predicted RBP	7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	C1orf162	Q8NEQ5	155 aa	Predicted RBP	7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	WDR48	Q8TAF3	677 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	SMARCC2	Q8TAQ2	1214 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	MZB1	Q8WU39	189 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	HOOK2	Q96ED9	719 aa		7.3	□□□□□ -1.24
HERPUD1-208	ENST00000563911	FAXDC2	Q96IV6	333 aa		7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms