RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 DDX50Q9BQ39 737 aaKnown RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 MTG1Q9BT17 334 aaPredicted RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 ABI2Q9NYB9 513 aaPredicted RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 LSM7Q9UK45 103 aaKnown RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 NKRFO15226 690 aaKnown RBP eCLIP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 CSDE1O75534 798 aaKnown RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 PAMP19021 973 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 TTC19Q6DKK2 380 aaPredicted RBP18.41■□□□□ 0.54
PTPN21-208ENST00000556564 PCGF5Q86SE9 256 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 HASPINQ8TF76 798 aa18.41■□□□□ 0.54
PTPN21-208ENST00000556564 ZC3H11AO75152 810 aaKnown RBP eCLIP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 GRAP2O75791 330 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 GNL1P36915 607 aaPredicted RBP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 CDH6P55285 790 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 SEMA3FQ13275 785 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 SNX17Q15036 470 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 SMAD1Q15797 465 aaKnown RBP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 SENP7Q9BQF6 1050 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 SLMAPQ14BN4 828 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 SPOPLQ6IQ16 392 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 TTC7AQ9ULT0 858 aaPredicted RBP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 GAS2O43903 313 aaKnown RBP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 PPARGP37231 505 aaPredicted RBP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 NSUN2Q08J23 767 aaKnown RBP eCLIP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 METTL7BQ6UX53 244 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 LRRC8CQ8TDW0 803 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 COLEC11Q9BWP8 271 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 KRT7P08729 469 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 SKIP12755 728 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 CENPUQ71F23 418 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 KDELC2Q7Z4H8 507 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 C18orf8Q96DM3 657 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 MMTAG2Q9BU76 263 aaKnown RBP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 LTN1O94822 1766 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 PIK3C2AO00443 1686 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 DNAJB3Q8WWF6 145 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 OSMRQ99650 979 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 NT5C1AQ9BXI3 368 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 DYRK4Q9NR20 520 aa18.4■□□□□ 0.54
PTPN21-208ENST00000556564 TSR3Q9UJK0 312 aaKnown RBP18.4■□□□□ 0.54
PTPN21-208ENST00000556564 LRG1P02750 347 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 HEATR6Q6AI08 1181 aaKnown RBP18.39■□□□□ 0.53
PTPN21-208ENST00000556564 TMEM39AQ9NV64 488 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 STRNO43815 780 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 ADCYAP1R1P41586 468 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 NOP14P78316 857 aaKnown RBP18.39■□□□□ 0.53
PTPN21-208ENST00000556564 ACVR2BQ13705 512 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 GRIK4Q16099 956 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 CABS1Q96KC9 395 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 RNF208Q9H0X6 261 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 HMX1Q9NP08 348 aaPredicted RBP18.39■□□□□ 0.53
PTPN21-208ENST00000556564 DIS3Q9Y2L1 958 aaKnown RBP18.39■□□□□ 0.53
PTPN21-208ENST00000556564 RTN2O75298 545 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 SEC31AO94979 1220 aaKnown RBP18.39■□□□□ 0.53
PTPN21-208ENST00000556564 KRT3P12035 628 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 MNAT1P51948 309 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 TPI1P60174 286 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 GNGT1P63211 74 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 NFRKBQ6P4R8 1299 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 SAMD3Q8N6K7 520 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 SEPT8Q92599 483 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 HACD3Q9P035 362 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 RNF14Q9UBS8 474 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 H3BRB1 525 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 ODC1P11926 461 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 CYP2C19P33261 490 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 TAF6P49848 677 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 MFSD10Q14728 455 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 ASIC4Q96FT7 647 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 TUT1Q9H6E5 874 aaKnown RBP18.39■□□□□ 0.53
PTPN21-208ENST00000556564 TMEM8AQ9HCN3 771 aa18.39■□□□□ 0.53
PTPN21-208ENST00000556564 DDX56Q9NY93 547 aaKnown RBP18.39■□□□□ 0.53
PTPN21-208ENST00000556564 MIF4GDA9UHW6 222 aaKnown RBP18.38■□□□□ 0.53
PTPN21-208ENST00000556564 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
PTPN21-208ENST00000556564 AKR1A1P14550 325 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 TTC13Q8NBP0 860 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 SAYSD1Q9NPB0 183 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 SH3BP1Q9Y3L3 701 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 BEX3Q00994 111 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 ROR1Q01973 937 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 ORC1Q13415 861 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 PDIK1LQ8N165 341 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 SPDYE1Q8NFV5 336 aaPredicted RBP18.38■□□□□ 0.53
PTPN21-208ENST00000556564 TMEM169Q96HH4 297 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 ROBO1Q9Y6N7 1651 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 ZNF541Q9H0D2 1346 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 RIC1Q4ADV7 1423 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 CCDC160A6NGH7 325 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 MT-ND3P03897 115 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 SLURP2P0DP57 97 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 SCP2P22307 547 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 FKBP1CQ5VVH2 108 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 STKLD1Q8NE28 680 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 KPNA6O60684 536 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 A0A087WZ62 844 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 EXOC1LA0A1B0GW35 172 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 F8W8V4 182 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 FGFR4P22455 802 aa18.38■□□□□ 0.53
PTPN21-208ENST00000556564 PCSK1P29120 753 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms