RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 NAB2Q15742 525 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 ISM2Q6H9L7 571 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 ADSSL1Q8N142 457 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 COLGALT1Q8NBJ5 622 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 ZSWIM2Q8NEG5 633 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 PPP1R10Q96QC0 940 aaKnown RBP23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 FAM213AQ9BRX8 229 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 PLVAPQ9BX97 442 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 RPF1Q9H9Y2 349 aaKnown RBP23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 AAASQ9NRG9 546 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 MTUS1Q9ULD2 1270 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 TRAF3IP3Q9Y228 551 aa23.34■■□□□ 1.33
SDR39U1-208ENST00000554698 RB1P06400 928 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 THP07101 528 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 CTNNB1P35222 781 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 ZCWPW2Q504Y3 356 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 SPOUT1Q5T280 376 aaKnown RBP23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 COLGALT2Q8IYK4 626 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 GPD1LQ8N335 351 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 ARNTL2Q8WYA1 636 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 FBXL18Q96ME1 805 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 ZMAT2Q96NC0 199 aaKnown RBP23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 CERS4Q9HA82 394 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 DNAJB4Q9UDY4 337 aa23.33■■□□□ 1.33
SDR39U1-208ENST00000554698 CLIC2O15247 247 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 ZC3H11AO75152 810 aaKnown RBP eCLIP23.32■■□□□ 1.329e-8■■□□□ 13.7
SDR39U1-208ENST00000554698 BCAR1P56945 870 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 PPP2R3AQ06190 1150 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 GLRA4Q5JXX5 417 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 KCNT2Q6UVM3 1135 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 SLC9A9Q8IVB4 645 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 CD302Q8IX05 232 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 FBXO22Q8NEZ5 403 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 ZNF558Q96NG5 402 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 FAM193BQ96PV7 902 aaPredicted RBP23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 TMEM175Q9BSA9 504 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 KIAA1586Q9HCI6 787 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 DMAC2Q9NW81 257 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 PCDHB12Q9Y5F1 795 aa23.32■■□□□ 1.32
SDR39U1-208ENST00000554698 CARNS1A5YM72 827 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 GOLGA8IPA6NC78 632 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 EPOPA6NHQ4 379 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 GOLGA8JA6NMD2 632 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 LACTBL1A8MY62 500 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 PPP1R2P41236 205 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 TUSC3Q13454 348 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 MYBPC2Q14324 1141 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 GRIN2CQ14957 1233 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 NFIL3Q16649 462 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 CENPPQ6IPU0 288 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 RBM43Q6ZSC3 357 aaKnown RBP23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 Q7L0L9 218 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 BRSK2Q8IWQ3 736 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 XXYLT1Q8NBI6 393 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 P2RX5Q93086 422 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 TSPAN18Q96SJ8 248 aa23.31■■□□□ 1.32
SDR39U1-208ENST00000554698 CALUO43852 315 aaPredicted RBP23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 NR3C1P04150 777 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 GALTP07902 379 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 CD44P16070 742 aaKnown RBP23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 PTMSP20962 102 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 PBX3P40426 434 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 SLC11A1P49279 550 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 ALDH7A1P49419 539 aaKnown RBP23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 CYP2J2P51589 502 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 CBWD2Q8IUF1 395 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 C11orf84Q9BUA3 381 aaPredicted RBP23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 ASB7Q9H672 318 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 SLC38A7Q9NVC3 462 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 SZT2Q5T011 3432 aa23.3■■□□□ 1.32
SDR39U1-208ENST00000554698 PPP1R3GB7ZBB8 358 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 H3BNC9 293 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 IL18RAPO95256 599 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 PPM1AP35813 382 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 STIM1Q13586 685 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 HSP90AA2PQ14568 343 aaPredicted RBP23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 ZBTB6Q15916 424 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 EDRF1Q3B7T1 1238 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 SLC39A11Q8N1S5 342 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 DEFB123Q8N688 67 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 KLHL23Q8NBE8 558 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 DHTKD1Q96HY7 919 aaPredicted RBP23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 FAM161BQ96MY7 647 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 RBAKQ9NYW8 714 aaPredicted RBP23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 SPG21Q9NZD8 308 aa23.29■■□□□ 1.32
SDR39U1-208ENST00000554698 ZNF233A6NK53 670 aa23.28■■□□□ 1.32
SDR39U1-208ENST00000554698 PSMA7O14818 248 aa23.28■■□□□ 1.32
SDR39U1-208ENST00000554698 ALDH2P05091 517 aa23.28■■□□□ 1.32
SDR39U1-208ENST00000554698 SOX4Q06945 474 aaPredicted RBP23.28■■□□□ 1.32
SDR39U1-208ENST00000554698 SNRNP35Q16560 246 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-208ENST00000554698 CCDC183Q5T5S1 534 aa23.28■■□□□ 1.32
SDR39U1-208ENST00000554698 PRDM12Q9H4Q4 367 aa23.28■■□□□ 1.32
SDR39U1-208ENST00000554698 DERAQ9Y315 318 aa23.28■■□□□ 1.32
SDR39U1-208ENST00000554698 NRP1O14786 923 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 EXOC3O60645 756 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 LPXNO60711 386 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 FGF18O76093 207 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 ITGB1P05556 798 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 WNT7BP56706 349 aa23.27■■□□□ 1.32
SDR39U1-208ENST00000554698 SPAG1Q07617 926 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms