RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ATP2C1P98194 919 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 TCF15Q12870 199 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 DMP1Q13316 513 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 NBR1Q14596 966 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 TMEM132AQ24JP5 1023 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 XKR4Q5GH76 650 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 NT5DC1Q5TFE4 455 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 ATF7IP2Q5U623 682 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 EEF1DP3Q658K8 133 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 ARL6IP4Q66PJ3 421 aaKnown RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 DTHD1Q6ZMT9 781 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 LNX1Q8TBB1 728 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 FEZF2Q8TBJ5 459 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 RIN2Q8WYP3 895 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 SMG7Q92540 1137 aaKnown RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 KCNN1Q92952 543 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 ZNF707Q96C28 371 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 UROC1Q96N76 676 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 TBC1D32Q96NH3 1257 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 PPP1R10Q96QC0 940 aaKnown RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 NTPCRQ9BSD7 190 aaKnown RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 TTPALQ9BTX7 342 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 PRKD2Q9BZL6 878 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 NT5C3AQ9H0P0 336 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 PTPRHQ9HD43 1115 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 TOPORSQ9NS56 1045 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 SNTG2Q9NY99 539 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 KCND2Q9NZV8 630 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 ARHGAP28Q9P2N2 729 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 FBXW11Q9UKB1 542 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 DUSP12Q9UNI6 340 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 RBM19Q9Y4C8 960 aaKnown RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 ZFP37Q9Y6Q3 630 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 RIF1Q5UIP0 2472 aaKnown RBP7.27□□□□□ -1.25
SLIRP-203ENST00000554074 CACNA1IQ9P0X4 2223 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 DENND4CQ5VZ89 1909 aa7.27□□□□□ -1.25
SLIRP-203ENST00000554074 PTPRZ1P23471 2315 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 CASTOR2A6NHX0 329 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 GALR2O43603 387 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 N4BP1O75113 896 aaKnown RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 HIP1RO75146 1068 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 RFPL2O75678 378 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 HNRNPA1P09651 372 aaKnown RBP eCLIP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 FGFR3P22607 806 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 PROZP22891 400 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 GRM5P41594 1212 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 NPTX2P47972 431 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 PEX3P56589 373 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 MAPK7Q13164 816 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 PSMD5Q16401 504 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 IL17AQ16552 155 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 RTP2Q5QGT7 225 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 FAM171A1Q5VUB5 890 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 ASTLQ6HA08 431 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 RINT1Q6NUQ1 792 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 DCLRE1AQ6PJP8 1040 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 ALKAL1Q6UXT8 129 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 C1orf186Q6ZWK4 172 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 DAW1Q8N136 415 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 SPIRE2Q8WWL2 714 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 DDX27Q96GQ7 796 aaKnown RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 B3GALT6Q96L58 329 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 ACO2Q99798 780 aaKnown RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 CLSTN3Q9BQT9 956 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 PAAF1Q9BRP4 392 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 MMTAG2Q9BU76 263 aaKnown RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 KIFC3Q9BVG8 833 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 CCDC94Q9BW85 323 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 MRPL4Q9BYD3 311 aaKnown RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 KCNK12Q9HB15 430 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 SLC38A7Q9NVC3 462 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-203ENST00000554074 PATJQ8NI35 1801 aa7.26□□□□□ -1.25
SLIRP-203ENST00000554074 SCN1AP35498 2009 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 SMIM28A0A1B0GU29 152 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 CCDC169A6NNP5 214 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 PP2D1A8MPX8 630 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 ANHXE9PGG2 379 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 E9PMD0 336 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 H0YCG3 227 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 ABLIM1O14639 778 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 TRAPPC3O43617 180 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 PDGFBP01127 241 aaPredicted RBP7.25□□□□□ -1.25
SLIRP-203ENST00000554074 MCF2P10911 925 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 LAMP2P13473 410 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 KCNE1P15382 129 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 SCP2P22307 547 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 GBP2P32456 591 aaPredicted RBP7.25□□□□□ -1.25
SLIRP-203ENST00000554074 YARSP54577 528 aaKnown RBP7.25□□□□□ -1.25
SLIRP-203ENST00000554074 RAB33AQ14088 237 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 UPP1Q16831 310 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 UVSSAQ2YD98 709 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 LIN9Q5TKA1 542 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 MCTP1Q6DN14 999 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 PRSS55Q6UWB4 352 aaPredicted RBP7.25□□□□□ -1.25
SLIRP-203ENST00000554074 TAS1R3Q7RTX0 852 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 KCNK18Q7Z418 384 aa7.25□□□□□ -1.25
SLIRP-203ENST00000554074 PALB2Q86YC2 1186 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms