RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 C15orf39Q6ZRI6 1047 aa10.69□□□□□ -0.7
GCN1-208ENST00000551549 CEP57Q86XR8 500 aa10.69□□□□□ -0.7
GCN1-208ENST00000551549 ZDHHC14Q8IZN3 488 aa10.69□□□□□ -0.7
GCN1-208ENST00000551549 SYT2Q8N9I0 419 aaPredicted RBP10.69□□□□□ -0.7
GCN1-208ENST00000551549 CMASQ8NFW8 434 aaPredicted RBP10.69□□□□□ -0.7
GCN1-208ENST00000551549 LRRC15Q8TF66 581 aa10.69□□□□□ -0.7
GCN1-208ENST00000551549 ZNF707Q96C28 371 aaPredicted RBP10.69□□□□□ -0.7
GCN1-208ENST00000551549 PPP1R10Q96QC0 940 aaKnown RBP10.69□□□□□ -0.7
GCN1-208ENST00000551549 TTPALQ9BTX7 342 aa10.69□□□□□ -0.7
GCN1-208ENST00000551549 TARS2Q9BW92 718 aaKnown RBP10.69□□□□□ -0.7
GCN1-208ENST00000551549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.69□□□□□ -0.7
GCN1-208ENST00000551549 RBM19Q9Y4C8 960 aaKnown RBP10.69□□□□□ -0.7
GCN1-208ENST00000551549 MYO10Q9HD67 2058 aa10.69□□□□□ -0.7
GCN1-208ENST00000551549 ZFHX2Q9C0A1 2572 aaPredicted RBP10.69□□□□□ -0.7
GCN1-208ENST00000551549 SMIM28A0A1B0GU29 152 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 ABLIM1O14639 778 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 MEFVO15553 781 aaPredicted RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 ADAM12O43184 909 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 N4BP1O75113 896 aaKnown RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 PDGFBP01127 241 aaPredicted RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 PLS3P13797 630 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 PROZP22891 400 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 GRM5P41594 1212 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 CLCNKBP51801 687 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 CREMQ03060 361 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 SOX4Q06945 474 aaPredicted RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 MTMR3Q13615 1198 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 CUL4AQ13619 759 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 DCLRE1AQ6PJP8 1040 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 CD300LGQ6UXG3 332 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 ALKAL1Q6UXT8 129 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 CCDC149Q6ZUS6 474 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 GPR65Q8IYL9 337 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 FBXL6Q8N531 539 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 TMEM161BQ8NDZ6 487 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 LNX1Q8TBB1 728 aaPredicted RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 SPIRE2Q8WWL2 714 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 ACSF2Q96CM8 615 aaPredicted RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 CDK5RAP3Q96JB5 506 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 ZBTB45Q96K62 511 aaPredicted RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 ZMAT2Q96NC0 199 aaKnown RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 CLSTN3Q9BQT9 956 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 NTPCRQ9BSD7 190 aaKnown RBP10.68□□□□□ -0.7
GCN1-208ENST00000551549 TIPINQ9BVW5 301 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 NT5C3AQ9H0P0 336 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 C17orf75Q9HAS0 396 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 GOLGA2P5Q9HBQ8 144 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 DPP7Q9UHL4 492 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 SORCS3Q9UPU3 1222 aa10.68□□□□□ -0.7
GCN1-208ENST00000551549 I3L4J1 428 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 B3GAT3O94766 335 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 C1RP00736 705 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 MAPTP10636 758 aaKnown RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 MCF2P10911 925 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 HARSP12081 509 aaKnown RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 UBA7P41226 1012 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 YARSP54577 528 aaKnown RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 VCPP55072 806 aaKnown RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 DHX8Q14562 1220 aaKnown RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 PSMD5Q16401 504 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 UPP1Q16831 310 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 SEZ6Q53EL9 994 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 XKR4Q5GH76 650 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 ELMSAN1Q6PJG2 1045 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 MPZL3Q6UWV2 235 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 OTOP3Q7RTS5 596 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 UBALD2Q8IYN6 164 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 PLCD3Q8N3E9 789 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 KCTD17Q8N5Z5 321 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 C3orf58Q8NDZ4 430 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 HDAC7Q8WUI4 952 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 PIK3R5Q8WYR1 880 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 SMG7Q92540 1137 aaKnown RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 C18orf25Q96B23 403 aaPredicted RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 AK8Q96MA6 479 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 TCHPQ9BT92 498 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 CCDC94Q9BW85 323 aaPredicted RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 PLEKHA4Q9H4M7 779 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 WDR6Q9NNW5 1121 aaKnown RBP10.67□□□□□ -0.7
GCN1-208ENST00000551549 ANKFY1Q9P2R3 1169 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 FRYLO94915 3013 aa10.67□□□□□ -0.7
GCN1-208ENST00000551549 VPS37CA5D8V6 355 aaPredicted RBP10.66□□□□□ -0.7
GCN1-208ENST00000551549 TMEM189-UBE2V1I3L0A0 370 aa10.66□□□□□ -0.7
GCN1-208ENST00000551549 PAPLNO95428 1278 aa10.66□□□□□ -0.7
GCN1-208ENST00000551549 FGFR3P22607 806 aa10.66□□□□□ -0.7
GCN1-208ENST00000551549 HOXD11P31277 338 aaPredicted RBP10.66□□□□□ -0.7
GCN1-208ENST00000551549 SMTNP53814 917 aa10.66□□□□□ -0.7
GCN1-208ENST00000551549 ELAVL2Q12926 359 aaKnown RBP10.66□□□□□ -0.7
GCN1-208ENST00000551549 STRN3Q13033 797 aa10.66□□□□□ -0.7
GCN1-208ENST00000551549 MCM6Q14566 821 aa10.66□□□□□ -0.7
GCN1-208ENST00000551549 KARSQ15046 597 aaKnown RBP10.66□□□□□ -0.7
GCN1-208ENST00000551549 SF3A1Q15459 793 aaKnown RBP10.66□□□□□ -0.7
GCN1-208ENST00000551549 RSPO2Q6UXX9 243 aaPredicted RBP10.66□□□□□ -0.7
GCN1-208ENST00000551549 CYP26C1Q6V0L0 522 aa10.66□□□□□ -0.7
GCN1-208ENST00000551549 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.66□□□□□ -0.7
GCN1-208ENST00000551549 GPBP1Q86WP2 473 aa10.66□□□□□ -0.7
GCN1-208ENST00000551549 TMEM130Q8N3G9 435 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms