RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 PRMT7Q9NVM4 692 aaPredicted RBP18.74■□□□□ 0.59
VPS29-204ENST00000548259 GDE1Q9NZC3 331 aa18.74■□□□□ 0.59
VPS29-204ENST00000548259 MRPS23Q9Y3D9 190 aaKnown RBP18.74■□□□□ 0.59
VPS29-204ENST00000548259 TPRP12270 2363 aaKnown RBP18.74■□□□□ 0.59
VPS29-204ENST00000548259 CASTOR2A6NHX0 329 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 ECI2O75521 394 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 REC8O95072 547 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 ARL2P36404 184 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 RAB33AQ14088 237 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 AXDND1Q5T1B0 1012 aaPredicted RBP18.73■□□□□ 0.59
VPS29-204ENST00000548259 ZBTB8OSQ8IWT0 167 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 ITFG1Q8TB96 612 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 HASPINQ8TF76 798 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 ADPGKQ9BRR6 497 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 XPNPEP1Q9NQW7 623 aa18.73■□□□□ 0.59
VPS29-204ENST00000548259 MTF2Q9Y483 593 aaPredicted RBP18.73■□□□□ 0.59
VPS29-204ENST00000548259 DOCK8Q8NF50 2099 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 LRRIQ4A6NIV6 560 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 MAN2B1O00754 1011 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 B4GALT5O43286 388 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 KIF4AO95239 1232 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 LYPLA2O95372 231 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 ADCY1Q08828 1119 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 NPY5RQ15761 445 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.72■□□□□ 0.59
VPS29-204ENST00000548259 RUFY3Q7L099 469 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 NPAS3Q8IXF0 933 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 ASAP3Q8TDY4 903 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 HAS1Q92839 578 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 EIF2AK1Q9BQI3 630 aaKnown RBP18.72■□□□□ 0.59
VPS29-204ENST00000548259 IER2Q9BTL4 223 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 PCDHA12Q9UN75 941 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 KCNJ14Q9UNX9 436 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 CYP46A1Q9Y6A2 500 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 CACNA1IQ9P0X4 2223 aa18.72■□□□□ 0.59
VPS29-204ENST00000548259 ACACBO00763 2458 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 N4BP3O15049 544 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 ZBTB39O15060 712 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 TRAPPC3O43617 180 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 LILRB5O75023 590 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 SLITRK3O94933 977 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 CD72P21854 359 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 GLRA2P23416 452 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 TARSP26639 723 aaKnown RBP18.71■□□□□ 0.59
VPS29-204ENST00000548259 OR1D2P34982 312 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 PPP4R3CPQ6ZMV5 832 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 PIK3AP1Q6ZUJ8 805 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 CDR2LQ86X02 465 aaPredicted RBP18.71■□□□□ 0.59
VPS29-204ENST00000548259 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 DNASE1L2Q92874 299 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 POLR3FQ9H1D9 316 aaPredicted RBP18.71■□□□□ 0.59
VPS29-204ENST00000548259 C2orf40Q9H1Z8 148 aa18.71■□□□□ 0.59
VPS29-204ENST00000548259 ELF1P32519 619 aa18.7■□□□□ 0.58
VPS29-204ENST00000548259 CENPQQ7L2Z9 268 aaPredicted RBP18.7■□□□□ 0.58
VPS29-204ENST00000548259 MCPH1Q8NEM0 835 aa18.7■□□□□ 0.58
VPS29-204ENST00000548259 NELL1Q92832 810 aa18.7■□□□□ 0.58
VPS29-204ENST00000548259 AIFM3Q96NN9 605 aa18.7■□□□□ 0.58
VPS29-204ENST00000548259 PAAF1Q9BRP4 392 aa18.7■□□□□ 0.58
VPS29-204ENST00000548259 BRMS1Q9HCU9 246 aa18.7■□□□□ 0.58
VPS29-204ENST00000548259 PRMT8Q9NR22 394 aaPredicted RBP18.7■□□□□ 0.58
VPS29-204ENST00000548259 KRT37O76014 449 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 LRG1P02750 347 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 XRCC6P12956 609 aaKnown RBP eCLIP18.69■□□□□ 0.58
VPS29-204ENST00000548259 RARRES1P49788 294 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 SPIRE1Q08AE8 756 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 STK3Q13188 491 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 TOB2Q14106 344 aaPredicted RBP18.69■□□□□ 0.58
VPS29-204ENST00000548259 ANKS3Q6ZW76 656 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 APBB1IPQ7Z5R6 666 aaPredicted RBP18.69■□□□□ 0.58
VPS29-204ENST00000548259 CELF5Q8N6W0 485 aaKnown RBP18.69■□□□□ 0.58
VPS29-204ENST00000548259 ING5Q8WYH8 240 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 ELSPBP1Q96BH3 223 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 HSD17B14Q9BPX1 270 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 HCFC1R1Q9NWW0 138 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 DNMT3BQ9UBC3 853 aaKnown RBP18.69■□□□□ 0.58
VPS29-204ENST00000548259 MTRRQ9UBK8 725 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 CACNG4Q9UBN1 327 aa18.69■□□□□ 0.58
VPS29-204ENST00000548259 FANCMQ8IYD8 2048 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 ZNF197O14709 1029 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 B3GAT3O94766 335 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 PTPN2P17706 415 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 PRPF4BQ13523 1007 aaKnown RBP18.68■□□□□ 0.58
VPS29-204ENST00000548259 CALCRLQ16602 461 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 MAPK6Q16659 721 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 FAM187BQ17R55 369 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 LAIR1Q6GTX8 287 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 WASF1Q92558 559 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 MCRS1Q96EZ8 462 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 BRD9Q9H8M2 597 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 ZSWIM6Q9HCJ5 1215 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 AVENQ9NQS1 362 aaPredicted RBP18.68■□□□□ 0.58
VPS29-204ENST00000548259 HEBP1Q9NRV9 189 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 SNTG2Q9NY99 539 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 BACE2Q9Y5Z0 518 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 CDY1Q9Y6F8 540 aa18.68■□□□□ 0.58
VPS29-204ENST00000548259 MTCL1Q9Y4B5 1905 aaKnown RBP18.67■□□□□ 0.58
VPS29-204ENST00000548259 DCDC2BA2VCK2 349 aa18.67■□□□□ 0.58
VPS29-204ENST00000548259 TMEM189-UBE2V1I3L0A0 370 aa18.67■□□□□ 0.58
VPS29-204ENST00000548259 PRRG1O14668 218 aa18.67■□□□□ 0.58
VPS29-204ENST00000548259 ADAM12O43184 909 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms