RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CD2BP2O95400 341 aaKnown RBP10.27□□□□□ -0.77
YBX3-218ENST00000546298 PLA2G4BP0C869 781 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 MCF2P10911 925 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 PLS3P13797 630 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 SCP2P22307 547 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 UBA7P41226 1012 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.27□□□□□ -0.77
YBX3-218ENST00000546298 KCNK18Q7Z418 384 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 DAW1Q8N136 415 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 SMG7Q92540 1137 aaKnown RBP10.27□□□□□ -0.77
YBX3-218ENST00000546298 RABGGTAQ92696 567 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 B3GALT6Q96L58 329 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 ACAP3Q96P50 834 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 PNMA5Q96PV4 448 aa10.27□□□□□ -0.77
YBX3-218ENST00000546298 TARS2Q9BW92 718 aaKnown RBP10.27□□□□□ -0.77
YBX3-218ENST00000546298 WDR6Q9NNW5 1121 aaKnown RBP10.27□□□□□ -0.77
YBX3-218ENST00000546298 KIAA1671Q9BY89 1806 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 PLXNA4Q9HCM2 1894 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 SMIM28A0A1B0GU29 152 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 SFI1A8K8P3 1242 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 SLC16A4O15374 487 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 TGM5O43548 720 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 TOM1L1O75674 476 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 ZMYND10O75800 440 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 KIF4AO95239 1232 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 BRD1O95696 1058 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 EDN1P05305 212 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 HNRNPA1P09651 372 aaKnown RBP eCLIP10.26□□□□□ -0.77
YBX3-218ENST00000546298 GBP2P32456 591 aaPredicted RBP10.26□□□□□ -0.77
YBX3-218ENST00000546298 NUBP1P53384 320 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 MAPK7Q13164 816 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 NAB2Q15742 525 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 PSMD5Q16401 504 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 TMEM119Q4V9L6 283 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 XKR4Q5GH76 650 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 RTP2Q5QGT7 225 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 LIN9Q5TKA1 542 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 LILRA6Q6PI73 481 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 PRSS55Q6UWB4 352 aaPredicted RBP10.26□□□□□ -0.77
YBX3-218ENST00000546298 MPZL3Q6UWV2 235 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 GLYCTKQ8IVS8 523 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 RASSF8Q8NHQ8 419 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 LNX1Q8TBB1 728 aaPredicted RBP10.26□□□□□ -0.77
YBX3-218ENST00000546298 HASPINQ8TF76 798 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 ASIC4Q96FT7 647 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 PPP1R10Q96QC0 940 aaKnown RBP10.26□□□□□ -0.77
YBX3-218ENST00000546298 PLIN2Q99541 437 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 PAAF1Q9BRP4 392 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 PRKD2Q9BZL6 878 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 IRF2BPLQ9H1B7 796 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 CDT1Q9H211 546 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 PTPRHQ9HD43 1115 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.26□□□□□ -0.77
YBX3-218ENST00000546298 IGSF9Q9P2J2 1179 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.26□□□□□ -0.77
YBX3-218ENST00000546298 EYSQ5T1H1 3165 aa10.26□□□□□ -0.77
YBX3-218ENST00000546298 WDR81Q562E7 1941 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 RFPL2O75678 378 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 PAPLNO95428 1278 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 ASGR2P07307 311 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 SPATA31D3P0C874 917 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 KCNE1P15382 129 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 RPL17P18621 184 aaKnown RBP10.25□□□□□ -0.77
YBX3-218ENST00000546298 FGFR3P22607 806 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 PROZP22891 400 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 AVPR2P30518 371 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 RPL9P32969 192 aaKnown RBP10.25□□□□□ -0.77
YBX3-218ENST00000546298 ABCD1P33897 745 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 LONP1P36776 959 aaKnown RBP10.25□□□□□ -0.77
YBX3-218ENST00000546298 PTPN5P54829 565 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 SLC12A3P55017 1021 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 OSTNP61366 133 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 RAD51AP2Q09MP3 1159 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 TDGQ13569 410 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 CUL4AQ13619 759 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 KYAT1Q16773 422 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 GLRA4Q5JXX5 417 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 ALKAL1Q6UXT8 129 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 ZPBP2Q6X784 338 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 SPATA31D4Q6ZUB0 917 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 ANKS3Q6ZW76 656 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 RTL10Q7L3V2 364 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 TAS1R3Q7RTX0 852 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 TMEM161BQ8NDZ6 487 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 NXPE3Q969Y0 559 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 SNX27Q96L92 541 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 CLSTN3Q9BQT9 956 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 CACNG4Q9UBN1 327 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 ODF2LQ9ULJ1 636 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 CLUHO75153 1309 aa10.25□□□□□ -0.77
YBX3-218ENST00000546298 VPS37CA5D8V6 355 aaPredicted RBP10.24□□□□□ -0.77
YBX3-218ENST00000546298 CLDN3O15551 220 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 XYLBO75191 536 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 FAM13AO94988 1023 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 KRT18P05783 430 aaKnown RBP10.24□□□□□ -0.77
YBX3-218ENST00000546298 CLTAP09496 248 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 MYBP10242 640 aa10.24□□□□□ -0.77
YBX3-218ENST00000546298 MAPTP10636 758 aaKnown RBP10.24□□□□□ -0.77
YBX3-218ENST00000546298 HARSP12081 509 aaKnown RBP10.24□□□□□ -0.77
YBX3-218ENST00000546298 HOXA9P31269 272 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms