RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 ERICH1Q86X53 443 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 FIBCD1Q8N539 461 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 BEST2Q8NFU1 509 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 ACAP3Q96P50 834 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 MKNK1Q9BUB5 465 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SUN2Q9UH99 717 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SOWAHDA6NJG2 315 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 RASSF10A6NK89 507 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 PDHXO00330 501 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 HAUS5O94927 633 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 KLHL2O95198 593 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 PRLRP16471 622 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SOX5P35711 763 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 RFC5P40937 340 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 MAP3K7CLP57077 242 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 TOB2Q14106 344 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 MAPK6Q16659 721 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 KNOP1Q1ED39 458 aaKnown RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 KRT24Q2M2I5 525 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 FAM133AQ8N9E0 248 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SLC44A5Q8NCS7 719 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 TTC8Q8TAM2 541 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 FAM151AQ8WW52 585 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 CHMP6Q96FZ7 201 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 DESI2Q9BSY9 194 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 TEX13BQ9BXU2 312 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 MTO1Q9Y2Z2 717 aaKnown RBP8.27□□□□□ -1.09
VPS13D-211ENST00000543710 ARHGAP23Q9P227 1491 aa8.27□□□□□ -1.09
VPS13D-211ENST00000543710 TTC36A6NLP5 189 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ROR1Q01973 937 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 PPP2R2DQ66LE6 453 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 TTBK2Q6IQ55 1244 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 SCYL2Q6P3W7 929 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 RASGRP2Q7LDG7 609 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 NLRP10Q86W26 655 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 MFN1Q8IWA4 741 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ZNF560Q96MR9 790 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 OSBPL9Q96SU4 736 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 MYL10Q9BUA6 226 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 RPTORQ8N122 1335 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 HSPA4LO95757 839 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 CCND1P24385 295 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 CNTFP26441 200 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 PTPN12Q05209 780 aaKnown RBP8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ELAVL2Q12926 359 aaKnown RBP8.26□□□□□ -1.09
VPS13D-211ENST00000543710 COLEC12Q5KU26 742 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 NLRP9Q7RTR0 991 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 TRAPPC11Q7Z392 1133 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ANKRD13CQ8N6S4 541 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 FAF2Q96CS3 445 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 MMS19Q96T76 1030 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 RNF146Q9NTX7 359 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ZNF70Q9UC06 446 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-211ENST00000543710 MAPK8IP1Q9UQF2 711 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 SNX5Q9Y5X3 404 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 A0A1B0GTH6 734 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 PFDN1O60925 122 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 POMCP01189 267 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 PRKAA2P54646 552 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 COASYQ13057 564 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 DGKDQ16760 1214 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 KBTBD12Q3ZCT8 623 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 MOXD1Q6UVY6 613 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 CCNJLQ8IV13 435 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 GPD1LQ8N335 351 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 RAB42Q8N4Z0 105 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 TBC1D19Q8N5T2 526 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 KLRG1Q96E93 195 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 CLIC6Q96NY7 704 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 CD209Q9NNX6 404 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 SATB2Q9UPW6 733 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 CASZ1Q86V15 1759 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ZNF609O15014 1411 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 VWDEQ8N2E2 1590 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 KDM1AO60341 852 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 NR3C1P04150 777 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 CLTAP09496 248 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 LIG3P49916 1009 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 GRIN1Q05586 938 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 NAB1Q13506 487 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 PDXDC2PQ6P474 469 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 LRRC8BQ6P9F7 803 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 FAM9CQ8IZT9 166 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ICA1LQ8NDH6 482 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ANKRD7Q92527 254 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 PITPNM3Q9BZ71 974 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 CCSER1Q9C0I3 900 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 ARL2BPQ9Y2Y0 163 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 L3MBTL1Q9Y468 752 aa8.26□□□□□ -1.09
VPS13D-211ENST00000543710 A0A0A6YYK5 440 aaPredicted RBP8.25□□□□□ -1.09
VPS13D-211ENST00000543710 O00370 1275 aa8.25□□□□□ -1.09
VPS13D-211ENST00000543710 GAS2O43903 313 aaKnown RBP8.25□□□□□ -1.09
VPS13D-211ENST00000543710 TADA3O75528 432 aa8.25□□□□□ -1.09
VPS13D-211ENST00000543710 MYO1DO94832 1006 aa8.25□□□□□ -1.09
VPS13D-211ENST00000543710 SNUPNO95149 360 aaKnown RBP8.25□□□□□ -1.09
VPS13D-211ENST00000543710 PSMA2P25787 234 aa8.25□□□□□ -1.09
VPS13D-211ENST00000543710 EDRF1Q3B7T1 1238 aa8.25□□□□□ -1.09
VPS13D-211ENST00000543710 SCFD2Q8WU76 684 aa8.25□□□□□ -1.09
VPS13D-211ENST00000543710 MSTO1Q9BUK6 570 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms