RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TARS2Q9BW92 718 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 VN1R3Q9BXE9 311 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MRPL17Q9NRX2 175 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ODF2LQ9ULJ1 636 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 BARX2Q9UMQ3 279 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GDAQ9Y2T3 454 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PRG3Q9Y2Y8 225 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TADA2AO75478 443 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RECQL4O94761 1208 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 FAM13AO94988 1023 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 EFEMP2O95967 443 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SOD2P04179 222 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MAPTP10636 758 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MCF2P10911 925 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SCP2P22307 547 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PROZP22891 400 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SSTR3P32745 418 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TXLNAP40222 546 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GRM5P41594 1212 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 NASPP49321 788 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TUSC3Q13454 348 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TAS1R1Q7RTX1 841 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 HAUS6Q7Z4H7 955 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZBTB33Q86T24 672 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PPFIBP1Q86W92 1011 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ADHFE1Q8IWW8 467 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SMRP1Q8NCR6 262 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SLC22A17Q8WUG5 538 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 LARP4BQ92615 738 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZBTB45Q96K62 511 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KLHL5Q96PQ7 755 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 REEP2Q9BRK0 252 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 HERC2P3Q9BVR0 1158 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CCDC94Q9BW85 323 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 EMILIN2Q9BXX0 1053 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 S1PR5Q9H228 398 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PARVGQ9HBI0 331 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CD320Q9NPF0 282 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MARCH5Q9NX47 278 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TFIP11Q9UBB9 837 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PLXNA3P51805 1871 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MUC3AQ02505 3323 aa10.67□□□□□ -0.7
TNFRSF1A-214ENST00000543048 VWA8A3KMH1 1905 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PTGESO14684 152 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TOM1L1O75674 476 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 BRD1O95696 1058 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZSCAN22P10073 491 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KLRC2P26717 231 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZNF131P52739 623 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 YARSP54577 528 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 NCKAP1LP55160 1127 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 HSP90AA2PQ14568 343 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PTPN14Q15678 1187 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 USP41Q3LFD5 358 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZNF568Q3ZCX4 644 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TPRNQ4KMQ1 711 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 FOXD4L5Q5VV16 416 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KIAA0319Q5VV43 1072 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KIAA1841Q6NSI8 718 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SYCE2Q6PIF2 218 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MPZL3Q6UWV2 235 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ALKAL1Q6UXT8 129 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZPBP2Q6X784 338 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CCDC73Q6ZRK6 1079 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SV2BQ7L1I2 683 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 LINC00301Q8NCQ3 95 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 FOXD4L4Q8WXT5 416 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KCNN1Q92952 543 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ACAP3Q96P50 834 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 POP1Q99575 1024 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PANK2Q9BZ23 570 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CDT1Q9H211 546 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CXCL16Q9H2A7 254 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZHX3Q9H4I2 956 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 STK17AQ9UEE5 414 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ADAM28Q9UKQ2 775 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 LHX6Q9UPM6 363 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 USP15Q9Y4E8 981 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 HCFC2Q9Y5Z7 792 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 DOCK6Q96HP0 2047 aa10.66□□□□□ -0.7
TNFRSF1A-214ENST00000543048 C2orf16Q68DN1 1984 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SMIM28A0A1B0GU29 152 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 F8W810 466 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 C2CD2LO14523 706 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ABLIM1O14639 778 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SPTLC2O15270 562 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CLDN3O15551 220 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TRAK2O60296 914 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PPP6R2O75170 966 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 URODP06132 367 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CNPP09543 421 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ABCD1P33897 745 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GLUD2P49448 558 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 OSTNP61366 133 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 DSG1Q02413 1049 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZP2Q05996 745 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 NAB2Q15742 525 aa10.65□□□□□ -0.7
TNFRSF1A-214ENST00000543048 XKR4Q5GH76 650 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms