RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 KLHL23Q8NBE8 558 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 RBBP8NLQ8NC74 664 aaPredicted RBP18.2■□□□□ 0.5
NELFA-216ENST00000542778 ATL2Q8NHH9 583 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 FGFBP2Q9BYJ0 223 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 POLR2AP24928 1970 aaKnown RBP18.2■□□□□ 0.5
NELFA-216ENST00000542778 H0Y3Z8 333 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 DDX3XO00571 662 aaKnown RBP eCLIP18.2■□□□□ 0.59e-7■□□□□ 10
NELFA-216ENST00000542778 KRT13P13646 458 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 ZNF211Q13398 564 aaPredicted RBP18.2■□□□□ 0.5
NELFA-216ENST00000542778 MPP2Q14168 576 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 WASHC2DQ5SRD0 308 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
NELFA-216ENST00000542778 TTC8Q8TAM2 541 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 FGD4Q96M96 766 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 KCNK9Q9NPC2 374 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 PARP2Q9UGN5 583 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 PCDHA3Q9Y5H8 950 aa18.2■□□□□ 0.5
NELFA-216ENST00000542778 STAT3P40763 770 aa18.19■□□□□ 0.5
NELFA-216ENST00000542778 GALCP54803 685 aa18.19■□□□□ 0.5
NELFA-216ENST00000542778 MAP3K10Q02779 954 aa18.19■□□□□ 0.5
NELFA-216ENST00000542778 MUM1Q2TAK8 710 aa18.19■□□□□ 0.5
NELFA-216ENST00000542778 ANGEL2Q5VTE6 544 aaKnown RBP18.19■□□□□ 0.5
NELFA-216ENST00000542778 U2AF1L4Q8WU68 220 aaKnown RBP18.19■□□□□ 0.5
NELFA-216ENST00000542778 INPP5DQ92835 1189 aa18.19■□□□□ 0.5
NELFA-216ENST00000542778 DNAJC19Q96DA6 116 aa18.19■□□□□ 0.5
NELFA-216ENST00000542778 ZNF333Q96JL9 665 aa18.19■□□□□ 0.5
NELFA-216ENST00000542778 PHF2O75151 1096 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 PYGBP11216 843 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 TARSP26639 723 aaKnown RBP18.18■□□□□ 0.5
NELFA-216ENST00000542778 DYNC1I2Q13409 638 aaKnown RBP18.18■□□□□ 0.5
NELFA-216ENST00000542778 FAM26FQ5R3K3 315 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 VPS36Q86VN1 386 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 VSIG1Q86XK7 387 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 NELFCDQ8IXH7 590 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 SH3TC2Q8TF17 1288 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 ERP27Q96DN0 273 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 RUNDC3BQ96NL0 473 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 ARMCX3Q9UH62 379 aaPredicted RBP18.18■□□□□ 0.5
NELFA-216ENST00000542778 SCOCQ9UIL1 159 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 HAO1Q9UJM8 370 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 FAM86B1E9PN63 330 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 SMAPO00193 183 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 FAM86B2P0C5J1 330 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 PPATQ06203 517 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 LRRC23Q53EV4 343 aaPredicted RBP18.18■□□□□ 0.5
NELFA-216ENST00000542778 TRIM74Q86UV6 250 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 TRIM73Q86UV7 250 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 MAGEB18Q96M61 343 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 LRRC27Q9C0I9 530 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 NMRK1Q9NWW6 199 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 NCANO14594 1321 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 PITPNM2Q9BZ72 1349 aa18.18■□□□□ 0.5
NELFA-216ENST00000542778 SIGLEC16A6NMB1 481 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 NVLO15381 856 aaKnown RBP18.17■□□□□ 0.5
NELFA-216ENST00000542778 EYA4O95677 639 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 CFBP00751 764 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 GSTA2P09210 222 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 HIRAP54198 1017 aaPredicted RBP18.17■□□□□ 0.5
NELFA-216ENST00000542778 SLC35G2Q8TBE7 412 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 GRAMD1AQ96CP6 724 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 SERPINB12Q96P63 405 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 TBC1D10AQ9BXI6 508 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 FHDC1Q9C0D6 1143 aaPredicted RBP18.17■□□□□ 0.5
NELFA-216ENST00000542778 CHCHD3Q9NX63 227 aaKnown RBP18.17■□□□□ 0.5
NELFA-216ENST00000542778 TBC1D7Q9P0N9 293 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 CTTNBP2NLQ9P2B4 639 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 LTBP3Q9NS15 1303 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 FOXO6A8MYZ6 492 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 VCAM1P19320 739 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 RPS12P25398 132 aaKnown RBP18.17■□□□□ 0.5
NELFA-216ENST00000542778 CHRNA3P32297 505 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 POLGP54098 1239 aaPredicted RBP18.17■□□□□ 0.5
NELFA-216ENST00000542778 ARHGAP4P98171 946 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 PRKG1Q13976 671 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 ZNF568Q3ZCX4 644 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 PRR16Q569H4 304 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 MAIP1Q8WWC4 291 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 DTNBP1Q96EV8 351 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 AGBL1Q96MI9 1066 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 KIAA1683Q9H0B3 1180 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 AJAP1Q9UKB5 411 aaPredicted RBP18.17■□□□□ 0.5
NELFA-216ENST00000542778 USP20Q9Y2K6 914 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 LRCH1Q9Y2L9 728 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 MROH7Q68CQ1 1323 aa18.17■□□□□ 0.5
NELFA-216ENST00000542778 PODXLO00592 558 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 ENTPD5O75356 428 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 ASNSP08243 561 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 PON1P27169 355 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 EPHB2P29323 1055 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 STX2P32856 288 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 FXR2P51116 673 aaKnown RBP eCLIP18.16■□□□□ 0.5
NELFA-216ENST00000542778 SETDB1Q15047 1291 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 ZC3H3Q8IXZ2 948 aaKnown RBP18.16■□□□□ 0.5
NELFA-216ENST00000542778 CRYGNQ8WXF5 182 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 ALG3Q92685 438 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 SLC7A6OSQ96CW6 309 aaPredicted RBP18.16■□□□□ 0.5
NELFA-216ENST00000542778 DENND2DQ9H6A0 471 aaPredicted RBP18.16■□□□□ 0.5
NELFA-216ENST00000542778 PCYOX1Q9UHG3 505 aa18.16■□□□□ 0.5
NELFA-216ENST00000542778 CHKBQ9Y259 395 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms