RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 COMMD10Q9Y6G5 202 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 USH1CQ9Y6N9 552 aa8.71□□□□□ -1.01
PRKAB1-207ENST00000542698 MRC1P22897 1456 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 MARF1Q9Y4F3 1742 aaKnown RBP8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 A6NJR5 290 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 PRPSAP2O60256 369 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 OPHN1O60890 802 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 LMNAP02545 664 aaKnown RBP8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 SHMT1P34896 483 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 KCNA1Q09470 495 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 MAP3K21Q5TCX8 1036 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 OR6B2Q6IFH4 312 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 FOXR2Q6PJQ5 311 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 KRT27Q7Z3Y8 459 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 KIF2BQ8N4N8 673 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 ATP11CQ8NB49 1132 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 BTBD6Q96KE9 485 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 PURBQ96QR8 312 aaKnown RBP8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 NUDCD1Q96RS6 583 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 FAM118BQ9BPY3 351 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 FOXP3Q9BZS1 431 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 SMG5Q9UPR3 1016 aaKnown RBP8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 USP54Q70EL1 1684 aa8.71□□□□□ -1.02
PRKAB1-207ENST00000542698 FAM86B1E9PN63 330 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 COPEO14579 308 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 KRT7P08729 469 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 FAM86B2P0C5J1 330 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 MAGEA4P43358 317 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 RAD23BP54727 409 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 RHBDL3P58872 404 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 TMPRSS15P98073 1019 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 CDR2Q01850 454 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ITGB3BPQ13352 177 aaPredicted RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 TFDP1Q14186 410 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SLC30A10Q6XR72 485 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 IRF2BP2Q7Z5L9 587 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ATP8B4Q8TF62 1192 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SH3GL2Q99962 352 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 FAM167BQ9BTA0 163 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 IFT122Q9HBG6 1241 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 RNF146Q9NTX7 359 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SLC9A2Q9UBY0 812 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 PCSK1NQ9UHG2 260 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 BCAP29Q9UHQ4 241 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 STRIP2Q9ULQ0 834 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 CFAP69A5D8W1 941 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 AGPSO00116 658 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 RGL2O15211 777 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 DGAT1O75907 488 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 HAUS5O94927 633 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 FSBPO95073 299 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ZBED1O96006 694 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 RALAP11233 206 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ACOT2P49753 483 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ARFIP2P53365 341 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SNRPFP62306 86 aaKnown RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 TFDP2Q14188 446 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 COG2Q14746 738 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 TRADDQ15628 312 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 HIF1AQ16665 826 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ZNF667Q5HYK9 610 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SLC27A3Q5K4L6 730 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ATG16L1Q676U5 607 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 HGSNATQ68CP4 663 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ACAD10Q6JQN1 1059 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 RCOR2Q8IZ40 523 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SLC20A1Q8WUM9 679 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 HSPH1Q92598 858 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 RNF34Q969K3 372 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 FAF2Q96CS3 445 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ERP27Q96DN0 273 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SPDL1Q96EA4 605 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 GANQ9H2C0 597 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 NGRNQ9NPE2 291 aaKnown RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 PPARGC1AQ9UBK2 798 aaKnown RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 CNOT7Q9UIV1 285 aaKnown RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SALL4Q9UJQ4 1053 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 IGF2BP3O00425 579 aaKnown RBP eCLIP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 TLR2O60603 784 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ARP10275 920 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 MUTP22033 750 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 CCND1P24385 295 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SERPINB6P35237 376 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SPP2Q13103 211 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 MYBPC2Q14324 1141 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ITIH4Q14624 930 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 VPS72Q15906 364 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 EEPD1Q7L9B9 569 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 YTHDF3Q7Z739 585 aaKnown RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 C4orf33Q8N1A6 199 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SCFD2Q8WU76 684 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ATG4AQ8WYN0 398 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 PI4K2AQ9BTU6 479 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 DDX4Q9NQI0 724 aaKnown RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 BATF3Q9NR55 127 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 MYO3BQ8WXR4 1341 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 DDTLA6NHG4 134 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms