RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PTGESO14684 152 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 TGFB1I1O43294 461 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 MBD3O95983 291 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 THP07101 528 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 KCNE1P15382 129 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 AFF1P51825 1210 aaKnown RBP21.17■□□□□ 0.98
DDX55-207ENST00000540763 OSTNP61366 133 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 KCNT2Q6UVM3 1135 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 SPRED2Q7Z698 418 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 NELFCDQ8IXH7 590 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 ARNTL2Q8WYA1 636 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 FAM193BQ96PV7 902 aaPredicted RBP21.17■□□□□ 0.98
DDX55-207ENST00000540763 IKZF4Q9H2S9 585 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 KCTD10Q9H3F6 313 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 CLSTN2Q9H4D0 955 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 RPF1Q9H9Y2 349 aaKnown RBP21.17■□□□□ 0.98
DDX55-207ENST00000540763 AGPAT3Q9NRZ7 376 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 MIOSQ9NXC5 875 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 HCSTQ9UBK5 93 aa21.17■□□□□ 0.98
DDX55-207ENST00000540763 TTC26A0AVF1 554 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 PDXKO00764 312 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 POMCP01189 267 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 PPP1R2P41236 205 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 ALDH7A1P49419 539 aaKnown RBP21.16■□□□□ 0.98
DDX55-207ENST00000540763 GRIN2CQ14957 1233 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 SLC10A6Q3KNW5 377 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 COLGALT2Q8IYK4 626 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 TRIML1Q8N9V2 468 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 PPP1R10Q96QC0 940 aaKnown RBP21.16■□□□□ 0.98
DDX55-207ENST00000540763 CBWD1Q9BRT8 395 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 KIAA1586Q9HCI6 787 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 SLC38A7Q9NVC3 462 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 KIAA1468Q9P260 1216 aa21.16■□□□□ 0.98
DDX55-207ENST00000540763 EXTL3O43909 919 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 ZC3H11AO75152 810 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDX55-207ENST00000540763 DDHD2O94830 711 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 CXCL8P10145 99 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 TNFSF9P41273 254 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 BCAR1P56945 870 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 UBE3AQ05086 875 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 PPP2R3AQ06190 1150 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 TUSC3Q13454 348 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 MYBPC2Q14324 1141 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 NAB2Q15742 525 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 ENOX2Q16206 610 aaKnown RBP21.15■□□□□ 0.98
DDX55-207ENST00000540763 ZNF280BQ86YH2 543 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 GPD1LQ8N335 351 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 FBXL18Q96ME1 805 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 LMAN2LQ9H0V9 348 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 ASB7Q9H672 318 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 STK39Q9UEW8 545 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 MAN1B1Q9UKM7 699 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 MTUS1Q9ULD2 1270 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 PLAGL2Q9UPG8 496 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 TRAF3IP3Q9Y228 551 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 PRUNE2Q8WUY3 3088 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 CHD7Q9P2D1 2997 aa21.15■□□□□ 0.98
DDX55-207ENST00000540763 SMIM28A0A1B0GU29 152 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 MEFVO15553 781 aaPredicted RBP21.14■□□□□ 0.97
DDX55-207ENST00000540763 GALTP07902 379 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 MCM4P33991 863 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 PLCB3Q01970 1234 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 NFIL3Q16649 462 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 SEZ6Q53EL9 994 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 ZBTB41Q5SVQ8 909 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 CRELD2Q6UXH1 353 aaPredicted RBP21.14■□□□□ 0.97
DDX55-207ENST00000540763 SLC9A9Q8IVB4 645 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 SLC39A11Q8N1S5 342 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 GPT2Q8TD30 523 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 ERCC4Q92889 916 aaPredicted RBP21.14■□□□□ 0.97
DDX55-207ENST00000540763 NUP62CLQ9H1M0 184 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 CERS4Q9HA82 394 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 SPG21Q9NZD8 308 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 HSPBP1Q9NZL4 362 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 LMCD1Q9NZU5 365 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 DNAJB4Q9UDY4 337 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 LZTS1Q9Y250 596 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 DERAQ9Y315 318 aa21.14■□□□□ 0.97
DDX55-207ENST00000540763 EPOPA6NHQ4 379 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 CALUO43852 315 aaPredicted RBP21.13■□□□□ 0.97
DDX55-207ENST00000540763 B4GALT3O60512 393 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 IL18RAPO95256 599 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 POU3F3P20264 500 aaPredicted RBP21.13■□□□□ 0.97
DDX55-207ENST00000540763 ACOT2P49753 483 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 GPM6BQ13491 265 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 NT5DC4Q86YG4 428 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 BRSK2Q8IWQ3 736 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 KLHL23Q8NBE8 558 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 UROC1Q96N76 676 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 GAS2L1Q99501 681 aaPredicted RBP21.13■□□□□ 0.97
DDX55-207ENST00000540763 FAM213AQ9BRX8 229 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 PRDM12Q9H4Q4 367 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 VCANP13611 3396 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 TTC28Q96AY4 2481 aa21.13■□□□□ 0.97
DDX55-207ENST00000540763 XPOTO43592 962 aaKnown RBP21.12■□□□□ 0.97
DDX55-207ENST00000540763 LPXNO60711 386 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 FGF18O76093 207 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 ALDH2P05091 517 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 PTMSP20962 102 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 SLC11A1P49279 550 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms