RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 CHST7Q9NS84 486 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 STK39Q9UEW8 545 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 SSX2IPQ9Y2D8 614 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 KIF3AQ9Y496 699 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 ARIH1Q9Y4X5 557 aaPredicted RBP12.55□□□□□ -0.4
CPNE7-206ENST00000532500 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.4
CPNE7-206ENST00000532500 CACNA1HO95180 2353 aa12.55□□□□□ -0.4
CPNE7-206ENST00000532500 NARSO43776 548 aaKnown RBP12.54□□□□□ -0.4
CPNE7-206ENST00000532500 MRE11P49959 708 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 EFNA5P52803 228 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 NTHL1P78549 312 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 MAPK7Q13164 816 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 DMP1Q13316 513 aaPredicted RBP12.54□□□□□ -0.4
CPNE7-206ENST00000532500 NAB2Q15742 525 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 DCAF4L1Q3SXM0 396 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 RINT1Q6NUQ1 792 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 OTOP3Q7RTS5 596 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 TAS1R3Q7RTX0 852 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 BMP8AQ7Z5Y6 402 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 ZDHHC14Q8IZN3 488 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 ZBTB45Q96K62 511 aaPredicted RBP12.54□□□□□ -0.4
CPNE7-206ENST00000532500 PNMA5Q96PV4 448 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 MYADMQ96S97 322 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 TCHPQ9BT92 498 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 TTPALQ9BTX7 342 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 CDT1Q9H211 546 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 MFSD1Q9H3U5 465 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 ANKFY1Q9P2R3 1169 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 CLUHO75153 1309 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 PHLPP2Q6ZVD8 1323 aa12.54□□□□□ -0.4
CPNE7-206ENST00000532500 ZNF638Q14966 1978 aaKnown RBP12.53□□□□□ -0.4
CPNE7-206ENST00000532500 CCL16O15467 120 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 MUTP22033 750 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 AVPR2P30518 371 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPNE7-206ENST00000532500 BRCC3P46736 316 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 CLCNKBP51801 687 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 ATP2C1P98194 919 aaPredicted RBP12.53□□□□□ -0.4
CPNE7-206ENST00000532500 SOX4Q06945 474 aaPredicted RBP12.53□□□□□ -0.4
CPNE7-206ENST00000532500 ELMSAN1Q6PJG2 1045 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 UBALD2Q8IYN6 164 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 FLCNQ8NFG4 579 aa12.53□□□□□ -0.4
CPNE7-206ENST00000532500 ZNF707Q96C28 371 aaPredicted RBP12.53□□□□□ -0.4
CPNE7-206ENST00000532500 ACO2Q99798 780 aaKnown RBP12.53□□□□□ -0.4
CPNE7-206ENST00000532500 SCN1AP35498 2009 aa12.52□□□□□ -0.4
CPNE7-206ENST00000532500 MYO15AQ9UKN7 3530 aa12.52□□□□□ -0.4
CPNE7-206ENST00000532500 CFAP54Q96N23 3096 aa12.52□□□□□ -0.4
CPNE7-206ENST00000532500 VPS37CA5D8V6 355 aaPredicted RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 LAD1O00515 517 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 CFHP08603 1231 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 TKTP29401 623 aaKnown RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 PRPHP41219 470 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 TCF15Q12870 199 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 LARP1BQ659C4 914 aaKnown RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 C15orf39Q6ZRI6 1047 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 C1orf186Q6ZWK4 172 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 GRASPQ7Z6J2 395 aaPredicted RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 C3orf58Q8NDZ4 430 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 LNX1Q8TBB1 728 aaPredicted RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 C18orf25Q96B23 403 aaPredicted RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 PPP1R10Q96QC0 940 aaKnown RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 CLSTN3Q9BQT9 956 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 CCDC94Q9BW85 323 aaPredicted RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 NT5C3AQ9H0P0 336 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 KCNK12Q9HB15 430 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 FBXL21Q9UKT6 434 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 TNFSF13BQ9Y275 285 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 USTQ9Y2C2 406 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 TSC2P49815 1807 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 KIF26AQ9ULI4 1882 aaPredicted RBP12.52□□□□□ -0.41
CPNE7-206ENST00000532500 FRYLO94915 3013 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 ZMYM2Q9UBW7 1377 aa12.52□□□□□ -0.41
CPNE7-206ENST00000532500 TICRRQ7Z2Z1 1910 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 SMIM28A0A1B0GU29 152 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 H0Y858 1186 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 STK25O00506 426 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 B3GAT3O94766 335 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 PLA2G4BP0C869 781 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 OR1D2P34982 312 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 YARSP54577 528 aaKnown RBP12.51□□□□□ -0.41
CPNE7-206ENST00000532500 PTPN5P54829 565 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 ARPP19P56211 112 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 GRIN1Q05586 938 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 SPAG1Q07617 926 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 TDGQ13569 410 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 LIN9Q5TKA1 542 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 RSPO2Q6UXX9 243 aaPredicted RBP12.51□□□□□ -0.41
CPNE7-206ENST00000532500 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
CPNE7-206ENST00000532500 TMEM105Q8N8V8 129 aa12.51□□□□□ -0.41
CPNE7-206ENST00000532500 CMASQ8NFW8 434 aaPredicted RBP12.51□□□□□ -0.41
CPNE7-206ENST00000532500 RASSF8Q8NHQ8 419 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms