RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 R3HDMLQ9H3Y0 253 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 EBF2Q9HAK2 575 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 HAUS2Q9NVX0 235 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
USP35-207ENST00000530546 BUB1BO60566 1050 aaPredicted RBP12.4□□□□□ -0.42
USP35-207ENST00000530546 SGPL1O95470 568 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 SEC24CP53992 1094 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 RWDD2BP57060 319 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 E2F5Q15329 346 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 CDCA2Q69YH5 1023 aaPredicted RBP12.4□□□□□ -0.42
USP35-207ENST00000530546 METTL13Q8N6R0 699 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 MCPH1Q8NEM0 835 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 IFT81Q8WYA0 676 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 OSBPL7Q9BZF2 842 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 ZNF302Q9NR11 478 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 RLFQ13129 1914 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 TMEM110-MUSTN1A8MSY1 372 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 CYP26A1O43174 497 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 ATP4AP20648 1035 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 SCTRP47872 440 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 GUCY2DQ02846 1103 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 XKR3Q5GH77 459 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 SLC17A8Q8NDX2 589 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 CCHCR1Q8TD31 782 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 TAS1R2Q8TE23 839 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 PARD3BQ8TEW8 1205 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 LMBR1Q8WVP7 490 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 PI4K2AQ9BTU6 479 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 RNF14Q9UBS8 474 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 POLR2AP24928 1970 aaKnown RBP12.4□□□□□ -0.42
USP35-207ENST00000530546 DOCK5Q9H7D0 1870 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 NFASCO94856 1347 aa12.4□□□□□ -0.42
USP35-207ENST00000530546 GMNCA6NCL1 334 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 LRRIQ4A6NIV6 560 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 DNM1LO00429 736 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 IRF6O14896 467 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 HEXIM1O94992 359 aaKnown RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 CALCAP01258 141 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 GLI1P08151 1106 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 ALDH5A1P51649 535 aaPredicted RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 PAK2Q13177 524 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 KIF22Q14807 665 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 EMC2Q15006 297 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 RBBP5Q15291 538 aaKnown RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 LBX2Q6XYB7 198 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 KREMEN1Q96MU8 473 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 SYT11Q9BT88 431 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 LOXHD1Q8IVV2 1947 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 FTLP02792 175 aaPredicted RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 TMEM253P0C7T8 217 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 LIG4P49917 911 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 PRPF4BQ13523 1007 aaKnown RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 SH3D19Q5HYK7 790 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 WDR78Q5VTH9 848 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 KRT39Q6A163 491 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 USP38Q8NB14 1042 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 CHST13Q8NET6 341 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 CCDC26Q8TAB7 109 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 TCP11Q8WWU5 503 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 RFFLQ8WZ73 363 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 DHX38Q92620 1227 aaKnown RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 SPDL1Q96EA4 605 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 KDM4CQ9H3R0 1056 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 PARP14Q460N5 1801 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 C5orf60A6NFR6 353 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 P4HA2O15460 535 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 ATP6V1G2O95670 118 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 HARSP12081 509 aaKnown RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 IBSPP21815 317 aaPredicted RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 TAS1R3Q7RTX0 852 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 SLC47A2Q86VL8 602 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 ADARB2Q9NS39 739 aaKnown RBP12.39□□□□□ -0.43
USP35-207ENST00000530546 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 INTUQ9ULD6 942 aa12.39□□□□□ -0.43
USP35-207ENST00000530546 KIAA1217Q5T5P2 1943 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 SOWAHBA6NEL2 793 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 GOLGA6L10A6NI86 522 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 TRAPPC3O43617 180 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 OATP04181 439 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 PGK2P07205 417 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 ACOT2P49753 483 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 SNRPFP62306 86 aaKnown RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 CYP24A1Q07973 514 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 RIPK1Q13546 671 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 TRADDQ15628 312 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 SV2AQ7L0J3 742 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 ADAT2Q7Z6V5 191 aaKnown RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 NOP9Q86U38 636 aaKnown RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 NT5DC3Q86UY8 548 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 CACNA2D3Q8IZS8 1091 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 GPD1LQ8N335 351 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 NTPCRQ9BSD7 190 aaKnown RBP12.38□□□□□ -0.43
USP35-207ENST00000530546 PDLIM7Q9NR12 457 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 GDF3Q9NR23 364 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 CTTNBP2NLQ9P2B4 639 aa12.38□□□□□ -0.43
USP35-207ENST00000530546 A0A0A6YYK5 440 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms