RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 CNR2P34972 360 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 TUSC3Q13454 348 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 GAS6Q14393 721 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 EMC2Q15006 297 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 LPAL2Q16609 132 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 AXDND1Q5T1B0 1012 aaPredicted RBP18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 TANGO2Q6ICL3 276 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 PDXDC1Q6P996 788 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 CPB2Q96IY4 423 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 MTRRQ9UBK8 725 aa18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 FASNP49327 2511 aaKnown RBP18.08■□□□□ 0.48
CHMP4A-203ENST00000527154 ZFYVE26Q68DK2 2539 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 MICAL2O94851 1124 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 P4HBP07237 508 aaKnown RBP18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 CHRNB1P11230 501 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 AKAP5P24588 427 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 MLLT6P55198 1093 aaPredicted RBP18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 MXD4Q14582 209 aaPredicted RBP18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 NPY5RQ15761 445 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 N4BP2L1Q5TBK1 243 aaPredicted RBP18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 FAM171A1Q5VUB5 890 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 HACE1Q8IYU2 909 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 RABGGTAQ92696 567 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 KCNMB3Q9NPA1 279 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 VPS54Q9P1Q0 977 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 CACNG4Q9UBN1 327 aa18.07■□□□□ 0.48
CHMP4A-203ENST00000527154 ARHGEF37A1IGU5 675 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 K7ESF4 209 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 NRG2O14511 850 aaPredicted RBP18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 PTGESO14684 152 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 PROS1P07225 676 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 RHOP08100 348 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 IFNAR1P17181 557 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 HOXA6P31267 233 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 DMWDQ09019 674 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 COL9A2Q14055 689 aaPredicted RBP18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 PRSS36Q5K4E3 855 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 SLC27A1Q6PCB7 646 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 MRPS23Q9Y3D9 190 aaKnown RBP18.06■□□□□ 0.48
CHMP4A-203ENST00000527154 TMEM189-UBE2V1I3L0A0 370 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 ARNTLO00327 626 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 FGFR3P22607 806 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 YWHABP31946 246 aaKnown RBP18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 SATB1Q01826 763 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 ELAVL2Q12926 359 aaKnown RBP18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 SIM2Q14190 667 aaPredicted RBP18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 SPEM1Q8N4L4 309 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 ING5Q8WYH8 240 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 MCRS1Q96EZ8 462 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 ANO2Q9NQ90 1003 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 POLIQ9UNA4 740 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 BACE2Q9Y5Z0 518 aa18.05■□□□□ 0.48
CHMP4A-203ENST00000527154 SLC37A4O43826 429 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 CEBPBP17676 345 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 OR1D2P34982 312 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 CXCL12P48061 93 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 SPIRE1Q08AE8 756 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 NCBP1Q09161 790 aaKnown RBP18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 CAPSQ13938 189 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 DAGLBQ8NCG7 672 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 FAM20AQ96MK3 541 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 MTRQ99707 1265 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 LXNQ9BS40 222 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 APOL6Q9BWW8 343 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 TRIM6Q9C030 488 aaPredicted RBP18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 LMAN1LQ9HAT1 526 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 ZNF334Q9HCZ1 680 aaPredicted RBP18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 NDRG2Q9UN36 371 aaKnown RBP18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 PCDHA4Q9UN74 947 aa18.04■□□□□ 0.48
CHMP4A-203ENST00000527154 INO80B-WBP1J3KQ70 363 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 B4GALT5O43286 388 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 HMGB1P09429 215 aaKnown RBP18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 ARL2P36404 184 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 PTGDRQ13258 359 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 EPHA7Q15375 998 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 CD300LGQ6UXG3 332 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 PRR23BQ6ZRT6 265 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 LONP2Q86WA8 852 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 FAM177A1Q8N128 213 aaPredicted RBP18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 ASAP3Q8TDY4 903 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 HASPINQ8TF76 798 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 FAM3CQ92520 227 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 IRF7Q92985 503 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 ASB16Q96NS5 453 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 TRPV4Q9HBA0 871 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 KLK14Q9P0G3 267 aa18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 DDX25Q9UHL0 483 aaKnown RBP18.03■□□□□ 0.48
CHMP4A-203ENST00000527154 ARID2Q68CP9 1835 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 GREB1Q4ZG55 1949 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 EVCP57679 992 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 TFDP1Q14186 410 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 KRT32Q14532 448 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 WDR44Q5JSH3 913 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 FAM78AQ5JUQ0 283 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 SLC8B1Q6J4K2 584 aa18.02■□□□□ 0.48
CHMP4A-203ENST00000527154 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms