RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 DOC2BQ14184 412 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 KIF22Q14807 665 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 ACAP1Q15027 740 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 SNX17Q15036 470 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 SKIDA1Q1XH10 827 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 B3GNT9Q6UX72 402 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 NUP43Q8NFH3 380 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 CALML6Q8TD86 181 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 U2AF1L4Q8WU68 220 aaKnown RBP5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 RTF1Q92541 710 aaKnown RBP5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 RPGRQ92834 1020 aaKnown RBP5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 HPS3Q969F9 1004 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 GJA10Q969M2 543 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 TIFAQ96CG3 184 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 G6PC3Q9BUM1 346 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 TMX4Q9H1E5 349 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 SLC12A5Q9H2X9 1139 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 CHST12Q9NRB3 414 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 IMPACTQ9P2X3 320 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 ZFHX2Q9C0A1 2572 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 ACACBO00763 2458 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 MAST4O15021 2626 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 EVC2Q86UK5 1308 aa5.73□□□□□ -1.49
HMGB1P23-201ENST00000518743 C5orf42Q9H799 3197 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 FLNBO75369 2602 aaKnown RBP5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 PRAMEF22A3QJZ6 481 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 MANSC4A6NHS7 340 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 H3BML4 177 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 SLC27A2O14975 620 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 ADAM23O75077 832 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 NDUFS2O75306 463 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 C4BPAP04003 597 aaKnown RBP5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 NTRK1P04629 796 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 ZGLP1P0C6A0 271 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 RHCEP18577 417 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 NF2P35240 595 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 CACNB3P54284 484 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 BCAR1P56945 870 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 CAP1Q01518 475 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 RHDQ02161 417 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 BTKQ06187 659 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 PRKG1Q13976 671 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 SLC9A5Q14940 896 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 NR0B2Q15466 257 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 GRAMD1BQ3KR37 738 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 CCDC178Q5BJE1 867 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 TOR2AQ5JU69 321 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 CATSPEREQ5SY80 951 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 BICRALQ6AI39 1079 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 IL31Q6EBC2 164 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 FAM180AQ6UWF9 173 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 USP45Q70EL2 814 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 NBPF5PQ86XG9 351 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 DNAJC10Q8IXB1 793 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 SPICE1Q8N0Z3 855 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 SHISA5Q8N114 240 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 LILRA2Q8N149 483 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 CAMKK1Q8N5S9 505 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 HIPK4Q8NE63 616 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 TGFBRAP1Q8WUH2 860 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 ZNF496Q96IT1 587 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 TUBGCP5Q96RT8 1024 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 FOXB1Q99853 325 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 ARPC5LQ9BPX5 153 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 CARS2Q9HA77 564 aaKnown RBP5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 NGRNQ9NPE2 291 aaKnown RBP5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 NLRC4Q9NPP4 1024 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 KLHL11Q9NVR0 708 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 PUF60Q9UHX1 559 aaKnown RBP5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 U3KQE9 123 aa5.72□□□□□ -1.49
HMGB1P23-201ENST00000518743 WDFY4Q6ZS81 3184 aa5.71□□□□□ -1.49
HMGB1P23-201ENST00000518743 TONSLQ96HA7 1378 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 SRGAP3O43295 1099 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 PPP1R11O60927 126 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 USP2O75604 605 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 FBLN1P23142 703 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 GPR15P49685 360 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 NEK3P51956 506 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 INHBEP58166 350 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 UBXN2AP68543 259 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 CYP4F8P98187 520 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 SRSF2Q01130 221 aaKnown RBP5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 RAPGEF1Q13905 1077 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 KRT72Q14CN4 511 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 MUM1Q2TAK8 710 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 THEMIS2Q5TEJ8 643 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 KIAA1841Q6NSI8 718 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 DARS2Q6PI48 645 aaKnown RBP5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 LILRA6Q6PI73 481 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 TOGARAM2Q6ZUX3 1019 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 KCNK18Q7Z418 384 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 MORC1Q86VD1 984 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 DENND1CQ8IV53 801 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 RAET1EQ8TD07 263 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 PNISRQ8TF01 805 aaKnown RBP5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 DIS3LQ8TF46 1054 aaKnown RBP5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 MVB12AQ96EY5 273 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 GBP4Q96PP9 640 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 MYD88Q99836 296 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms