RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 CEP135Q66GS9 1140 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 TAF2Q6P1X5 1199 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 APBB1IPQ7Z5R6 666 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-230ENST00000511944 SRGAP1Q7Z6B7 1085 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 RPAINQ86UA6 219 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 TC2NQ8N9U0 490 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 PCSK9Q8NBP7 692 aaKnown RBP9.9□□□□□ -0.82
NR1I3-230ENST00000511944 TRPV1Q8NER1 839 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 LMBR1Q8WVP7 490 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-230ENST00000511944 DNAJC7Q99615 494 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 TSEN34Q9BSV6 310 aaKnown RBP9.9□□□□□ -0.82
NR1I3-230ENST00000511944 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-230ENST00000511944 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
NR1I3-230ENST00000511944 LUC7L2Q9Y383 392 aaKnown RBP9.9□□□□□ -0.82
NR1I3-230ENST00000511944 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
NR1I3-230ENST00000511944 CNTNAP2Q9UHC6 1331 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 A0A0B4J269 797 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 PES1O00541 588 aaKnown RBP9.89□□□□□ -0.83
NR1I3-230ENST00000511944 AXIN1O15169 862 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CLIC2O15247 247 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 ARHGAP6O43182 974 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-230ENST00000511944 ADAMTS4O75173 837 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 PRKCBP05771 671 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 TRIM21P19474 475 aaKnown RBP9.89□□□□□ -0.83
NR1I3-230ENST00000511944 PROZP22891 400 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 ADSSP30520 456 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CASP4P49662 377 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CYP2J2P51589 502 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 AP3M2P53677 418 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CLDN10P78369 228 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CCZ1BP86790 482 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CCZ1P86791 482 aaPredicted RBP9.89□□□□□ -0.83
NR1I3-230ENST00000511944 MCL1Q07820 350 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 SYCP1Q15431 976 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 SURF1Q15526 300 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 SNRNP35Q16560 246 aaKnown RBP9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CTC1Q2NKJ3 1217 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 PRAMEF19Q5SWL8 479 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 NFRKBQ6P4R8 1299 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 SLC39A4Q6P5W5 647 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 GBP6Q6ZN66 633 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 TSHZ1Q6ZSZ6 1077 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 TRMT1LQ7Z2T5 733 aaKnown RBP9.89□□□□□ -0.83
NR1I3-230ENST00000511944 GPD1LQ8N335 351 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 PLPP7Q8NBV4 271 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 RNF149Q8NC42 400 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 KLHDC9Q8NEP7 349 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 NEK11Q8NG66 645 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CD99L2Q8TCZ2 262 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 RAET1EQ8TD07 263 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CACTINQ8WUQ7 758 aaKnown RBP9.89□□□□□ -0.83
NR1I3-230ENST00000511944 POMGNT1Q8WZA1 660 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 BICD1Q96G01 975 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 FAM81BQ96LP2 452 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 MFSD14AQ96MC6 490 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CBWD1Q9BRT8 395 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 SUGCTQ9HAC7 445 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 XPNPEP3Q9NQH7 507 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 CEP72Q9P209 647 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 TNFSF13BQ9Y275 285 aa9.89□□□□□ -0.83
NR1I3-230ENST00000511944 C17orf102A2RUQ5 167 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 ZNF233A6NK53 670 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 ANKRD63C9JTQ0 380 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 CLDN3O15551 220 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 CAND2O75155 1236 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 C6orf222P0C671 652 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-230ENST00000511944 SKILP12757 684 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 BMP1P13497 986 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 CAPN2P17655 700 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 ANXA13P27216 316 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 AXLP30530 894 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 FMO5P49326 533 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 CLCN3P51790 818 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 VAMP7P51809 220 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 SOX10P56693 466 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 MBTD1Q05BQ5 628 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 RBL2Q08999 1139 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 PSMD6Q15008 389 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 MEA1Q16626 185 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 EXOC3L4Q17RC7 722 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 GNASQ5JWF2 1037 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 CCSAPQ6IQ19 270 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-230ENST00000511944 TRIM46Q7Z4K8 759 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 RNF180Q86T96 592 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 RHPN2Q8IUC4 686 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 TMTC1Q8IUR5 882 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 KIAA0319LQ8IZA0 1049 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 LRRC71Q8N4P6 559 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 METTL13Q8N6R0 699 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-230ENST00000511944 OR8K1Q8NGG5 319 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 KIAA1524Q8TCG1 905 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 ZNF296Q8WUU4 475 aaPredicted RBP9.88□□□□□ -0.83
NR1I3-230ENST00000511944 EEF2KMTQ96G04 330 aa9.88□□□□□ -0.83
NR1I3-230ENST00000511944 ACO2Q99798 780 aaKnown RBP9.88□□□□□ -0.83
NR1I3-230ENST00000511944 KIFC3Q9BVG8 833 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms