RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CASTOR2A6NHX0 329 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 RETP07949 1114 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 NCBP1Q09161 790 aaKnown RBP17.35■□□□□ 0.37
HDAC6-236ENST00000498808 TUSC3Q13454 348 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 CAPSQ13938 189 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 MXD4Q14582 209 aaPredicted RBP17.35■□□□□ 0.37
HDAC6-236ENST00000498808 SLC5A9Q2M3M2 681 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 XKR9Q5GH70 373 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 TANGO2Q6ICL3 276 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 CELF5Q8N6W0 485 aaKnown RBP17.35■□□□□ 0.37
HDAC6-236ENST00000498808 ASAP3Q8TDY4 903 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 MCRS1Q96EZ8 462 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 RGL1Q9NZL6 768 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 PARP2Q9UGN5 583 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 RALYQ9UKM9 306 aaKnown RBP17.35■□□□□ 0.37
HDAC6-236ENST00000498808 NDRG2Q9UN36 371 aaKnown RBP17.35■□□□□ 0.37
HDAC6-236ENST00000498808 MRPS23Q9Y3D9 190 aaKnown RBP17.35■□□□□ 0.37
HDAC6-236ENST00000498808 RALGAPA1Q6GYQ0 2036 aa17.35■□□□□ 0.37
HDAC6-236ENST00000498808 LRP3O75074 770 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 NRLP54845 237 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 POU5F1BQ06416 359 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 RAB33AQ14088 237 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 INF2Q27J81 1249 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 UVSSAQ2YD98 709 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 SLC27A1Q6PCB7 646 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 MAMSTRQ6ZN01 415 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 PRR23CQ6ZRP0 262 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 PRR23BQ6ZRT6 265 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 BLIDQ8IZY5 108 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 DNASE1L2Q92874 299 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-236ENST00000498808 NCOA5Q9HCD5 579 aaKnown RBP17.34■□□□□ 0.37
HDAC6-236ENST00000498808 SEMA4GQ9NTN9 838 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 BAHCC1Q9P281 2608 aa17.34■□□□□ 0.37
HDAC6-236ENST00000498808 A0A1B0GUA9 196 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 PTGESO14684 152 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 GDF9O60383 454 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 RHOP08100 348 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 CEBPBP17676 345 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 FCARP24071 287 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 OR1D2P34982 312 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 TFDP1Q14186 410 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 EPHA7Q15375 998 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 OTUD6AQ7L8S5 288 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 DAGLBQ8NCG7 672 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 DYDC2Q96IM9 177 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 FAM20AQ96MK3 541 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 AGXT2Q9BYV1 514 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 CXCL16Q9H2A7 254 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 GDE1Q9NZC3 331 aa17.33■□□□□ 0.36
HDAC6-236ENST00000498808 NRG2O14511 850 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-236ENST00000498808 CCT2P78371 535 aaKnown RBP17.32■□□□□ 0.36
HDAC6-236ENST00000498808 CTTNQ14247 550 aaKnown RBP17.32■□□□□ 0.36
HDAC6-236ENST00000498808 GRM2Q14416 872 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 NAB2Q15742 525 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 CSRP2Q16527 193 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 FBXL16Q8N461 479 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 HAS1Q92839 578 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 ELSPBP1Q96BH3 223 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 IER2Q9BTL4 223 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 NFKBIZQ9BYH8 718 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 MTRRQ9UBK8 725 aa17.32■□□□□ 0.36
HDAC6-236ENST00000498808 TICRRQ7Z2Z1 1910 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 MAN2B1O00754 1011 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 GLRA2P23416 452 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 IGFBP6P24592 240 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-236ENST00000498808 ARL2P36404 184 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 CCR3P51677 355 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 SATB1Q01826 763 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 CYP4A11Q02928 519 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 SPIRE1Q08AE8 756 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 ELAVL2Q12926 359 aaKnown RBP17.31■□□□□ 0.36
HDAC6-236ENST00000498808 PDXDC1Q6P996 788 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-236ENST00000498808 JAKMIP1Q96N16 626 aaKnown RBP17.31■□□□□ 0.36
HDAC6-236ENST00000498808 ZSWIM4Q9H7M6 989 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 BRD9Q9H8M2 597 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 LMAN1LQ9HAT1 526 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 AVENQ9NQS1 362 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-236ENST00000498808 ANGPTL2Q9UKU9 493 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 FAM208BQ5VWN6 2430 aa17.31■□□□□ 0.36
HDAC6-236ENST00000498808 HRO43593 1189 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 KCNA4P22459 653 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 FGFR3P22607 806 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 PMLP29590 882 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 PDIA3P30101 505 aaKnown RBP17.3■□□□□ 0.36
HDAC6-236ENST00000498808 DMWDQ09019 674 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 SRSF5Q13243 272 aaKnown RBP17.3■□□□□ 0.36
HDAC6-236ENST00000498808 SIM2Q14190 667 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-236ENST00000498808 GAS6Q14393 721 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 PPP2R5DQ14738 602 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 NCAPH2Q6IBW4 605 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 RTL10Q7L3V2 364 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 KCNB2Q92953 911 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 AIFM3Q96NN9 605 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 CDY1Q9Y6F8 540 aa17.3■□□□□ 0.36
HDAC6-236ENST00000498808 THP07101 528 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 FAM78AQ5JUQ0 283 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 PRSS36Q5K4E3 855 aa17.29■□□□□ 0.36
HDAC6-236ENST00000498808 PPP4R3AQ6IN85 833 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms