RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
SMPD4-218ENST00000482171 HLA-DRAP01903 254 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 PDHA1P08559 390 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 RARRES1P49788 294 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 CLCN3P51790 818 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 FKBP1AP62942 108 aaKnown RBP12.03□□□□□ -0.48
SMPD4-218ENST00000482171 FAM47EQ6ZV65 393 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 ERO1BQ86YB8 467 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 CHMP6Q96FZ7 201 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 MRIQ9BWK5 157 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 C2orf40Q9H1Z8 148 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 SLC40A1Q9NP59 571 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-218ENST00000482171 OATP04181 439 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 WEE2P0C1S8 567 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 EPHX2P34913 555 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 NCOA4Q13772 614 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 TRAPPC11Q7Z392 1133 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 ARHGAP24Q8N264 748 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 MIS12Q9H081 205 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 DNAJC18Q9H819 358 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 YY1AP1Q9H869 796 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 ANAPC5Q9UJX4 755 aa12.03□□□□□ -0.48
SMPD4-218ENST00000482171 ASTN2O75129 1339 aaPredicted RBP12.02□□□□□ -0.48
SMPD4-218ENST00000482171 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 SCP2P22307 547 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 ZNF157P51786 506 aaPredicted RBP12.02□□□□□ -0.48
SMPD4-218ENST00000482171 YWHAGP61981 247 aaKnown RBP eCLIP12.02□□□□□ -0.48
SMPD4-218ENST00000482171 RNASELQ05823 741 aaKnown RBP12.02□□□□□ -0.48
SMPD4-218ENST00000482171 CAPRIN2Q6IMN6 1127 aaKnown RBP12.02□□□□□ -0.48
SMPD4-218ENST00000482171 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 DDX42Q86XP3 938 aaKnown RBP eCLIP12.02□□□□□ -0.48
SMPD4-218ENST00000482171 MAP7D3Q8IWC1 876 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 CCNYQ8ND76 341 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 ARMC2Q8NEN0 867 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 CFAP61Q8NHU2 1237 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 MIPOL1Q8TD10 442 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 TRPM4Q8TD43 1214 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 LRRC8CQ8TDW0 803 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 C1orf54Q8WWF1 131 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 P2RX7Q99572 595 aaKnown RBP12.02□□□□□ -0.48
SMPD4-218ENST00000482171 DNAJC7Q99615 494 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 WDR18Q9BV38 432 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 UBE4BO95155 1302 aa12.02□□□□□ -0.48
SMPD4-218ENST00000482171 PI4K2BG5E9Z4 385 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 CCDC188H7C350 402 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 OPHN1O60890 802 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 CTSHP09668 335 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 PTPRAP18433 802 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 ECM1Q16610 540 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 HP1BP3Q5SSJ5 553 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-218ENST00000482171 PCNX4Q63HM2 1172 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 SPATA24Q86W54 205 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 SCFD2Q8WU76 684 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 TSC22D3Q99576 134 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 SMARCAD1Q9H4L7 1026 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 M0QYV0 167 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 PFASO15067 1338 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 DSG3P32926 999 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 ZNF142P52746 1687 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-218ENST00000482171 EFNA5P52803 228 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 IL9RQ01113 521 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 ITIH3Q06033 890 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 NPY5RQ15761 445 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 PHLDB3Q6NSJ2 640 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 TRIM59Q8IWR1 403 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 ABI1Q8IZP0 508 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 C4orf32Q8N8J7 132 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 GPRC5AQ8NFJ5 357 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 CYFIP2Q96F07 1278 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 MKNK1Q9BUB5 465 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 A1CFQ9NQ94 594 aaKnown RBP12.02□□□□□ -0.49
SMPD4-218ENST00000482171 IGSF9BQ9UPX0 1349 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 USH1CQ9Y6N9 552 aa12.02□□□□□ -0.49
SMPD4-218ENST00000482171 TULP2O00295 520 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 PRPSAP2O60256 369 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 C6orf222P0C671 652 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-218ENST00000482171 PSMC1P62191 440 aaKnown RBP12.01□□□□□ -0.49
SMPD4-218ENST00000482171 NAB2Q15742 525 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 TATDN1Q6P1N9 297 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 DSTYKQ6XUX3 929 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 RILPQ96NA2 401 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 FHDC1Q9C0D6 1143 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-218ENST00000482171 IKZF4Q9H2S9 585 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 SLC38A10Q9HBR0 1119 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 AGAP1Q9UPQ3 857 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 A0A1W2PQJ5 194 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 MIF4GDA9UHW6 222 aaKnown RBP12.01□□□□□ -0.49
SMPD4-218ENST00000482171 COPB2P35606 906 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.491e-6■■■□□ 17.5
SMPD4-218ENST00000482171 SPATC1LQ9H0A9 340 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 NAGPAQ9UK23 515 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 SCINQ9Y6U3 715 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 PEX10O60683 326 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 DIAPH2O60879 1101 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 HERVK_113P62684 666 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 PTGISQ16647 500 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 LY6KQ17RY6 165 aa12.01□□□□□ -0.49
SMPD4-218ENST00000482171 CCDC14Q49A88 953 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms